Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_I19
(802 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005342-1|AAH05342.1| 282|Homo sapiens nucleosomal binding pro... 43 0.001
AL391294-1|CAI39708.1| 282|Homo sapiens nucleosomal binding pro... 43 0.001
AF250330-1|AAK14063.1| 282|Homo sapiens nucleosomal binding pro... 43 0.001
AF250329-1|AAK14062.1| 282|Homo sapiens nucleosomal binding pro... 43 0.001
AL391294-3|CAI39710.1| 201|Homo sapiens nucleosomal binding pro... 37 0.074
AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein. 31 4.8
AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of r... 31 4.8
AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of r... 31 4.8
AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor co-rep... 31 4.8
Z49250-1|CAA89217.1| 128|Homo sapiens HW2.1 (novel protein simi... 30 8.5
BT019970-1|AAV38773.1| 209|Homo sapiens MAX dimerization protei... 30 8.5
BT019969-1|AAV38772.1| 209|Homo sapiens MAX dimerization protei... 30 8.5
BC068060-1|AAH68060.1| 209|Homo sapiens MAX dimerization protei... 30 8.5
AL158068-1|CAM20460.1| 209|Homo sapiens MAX dimerization protei... 30 8.5
AK024501-1|BAB15791.1| 224|Homo sapiens FLJ00110 protein protein. 30 8.5
AF082740-1|AAF98553.1| 209|Homo sapiens Max-associated protein ... 30 8.5
AF040963-1|AAB97009.1| 209|Homo sapiens Mad4 homolog protein. 30 8.5
>BC005342-1|AAH05342.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 211 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 336
+GKE G DE E+ E GD +E+ D E GD E K+ VK
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229
>AL391294-1|CAI39708.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 211 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 336
+GKE G DE E+ E GD +E+ D E GD E K+ VK
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229
>AF250330-1|AAK14063.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 211 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 336
+GKE G DE E+ E GD +E+ D E GD E K+ VK
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229
>AF250329-1|AAK14062.1| 282|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 282
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 211 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 336
+GKE G DE E+ E GD +E+ D E GD E K+ VK
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229
>AL391294-3|CAI39710.1| 201|Homo sapiens nucleosomal binding
protein 1 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.074
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 211 NGKENGTDEAPEDSPAENGDAEESNDASENGD 306
+GKE G DE E+ E GD +E+ D E GD
Sbjct: 168 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGD 199
>AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.
Length = 2461
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 217 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 351
K T+EA E+ PA+ DAE + +E EKKE G R + A
Sbjct: 845 KSECTEEA-EEGPAKGKDAEAAEATAERALKAEKKEGGSGRATTA 888
>AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor extended
isofo protein.
Length = 2507
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 217 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 351
K T+EA E+ PA+ DAE + +E EKKE G R + A
Sbjct: 845 KSECTEEA-EEGPAKGKDAEAAEATAERALKAEKKEGGSGRATTA 888
>AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor alpha
protein.
Length = 2517
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 217 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 351
K T+EA E+ PA+ DAE + +E EKKE G R + A
Sbjct: 863 KSECTEEA-EEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTA 906
>AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor
co-repressor 2 variant protein.
Length = 1469
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 217 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 351
K T+EA E+ PA+ DAE + +E EKKE G R + A
Sbjct: 881 KSECTEEA-EEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTA 924
>Z49250-1|CAA89217.1| 128|Homo sapiens HW2.1 (novel protein similar
to mouse MAD4 (Max-interacting transcriptional rep
protein.
Length = 128
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 218 KRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRL 328
K++VP+ P R + +LK+A +H++ + Q R+ L
Sbjct: 12 KQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRAL 48
>BT019970-1|AAV38773.1| 209|Homo sapiens MAX dimerization protein 4
protein.
Length = 209
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 218 KRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRL 328
K++VP+ P R + +LK+A +H++ + Q R+ L
Sbjct: 77 KQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRAL 113
>BT019969-1|AAV38772.1| 209|Homo sapiens MAX dimerization protein 4
protein.
Length = 209
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 218 KRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRL 328
K++VP+ P R + +LK+A +H++ + Q R+ L
Sbjct: 77 KQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRAL 113
>BC068060-1|AAH68060.1| 209|Homo sapiens MAX dimerization protein 4
protein.
Length = 209
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 218 KRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRL 328
K++VP+ P R + +LK+A +H++ + Q R+ L
Sbjct: 77 KQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRAL 113
>AL158068-1|CAM20460.1| 209|Homo sapiens MAX dimerization protein 4
protein.
Length = 209
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 218 KRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRL 328
K++VP+ P R + +LK+A +H++ + Q R+ L
Sbjct: 77 KQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRAL 113
>AK024501-1|BAB15791.1| 224|Homo sapiens FLJ00110 protein protein.
Length = 224
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 218 KRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRL 328
K++VP+ P R + +LK+A +H++ + Q R+ L
Sbjct: 92 KQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRAL 128
>AF082740-1|AAF98553.1| 209|Homo sapiens Max-associated protein
protein.
Length = 209
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 218 KRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRL 328
K++VP+ P R + +LK+A +H++ + Q R+ L
Sbjct: 77 KQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRAL 113
>AF040963-1|AAB97009.1| 209|Homo sapiens Mad4 homolog protein.
Length = 209
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 218 KRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRL 328
K++VP+ P R + +LK+A +H++ + Q R+ L
Sbjct: 77 KQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRAL 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,285,632
Number of Sequences: 237096
Number of extensions: 1553914
Number of successful extensions: 3503
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3491
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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