Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_I07
(795 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 28 1.8
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.8
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 2.3
SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomy... 27 2.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 4.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 5.4
SPBC30D10.14 |||dienelactone hydrolase family|Schizosaccharomyce... 26 7.1
SPBC1685.03 |sec11||signal peptidase subunit Sec11 |Schizosaccha... 25 9.4
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.4
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 25 9.4
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +3
Query: 291 YEIHPETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAED 470
Y ++P D + + + + S+D ++ E D+ ++ D Q VEN +K +++D
Sbjct: 577 YLLYPSYDLPDRNLSEHSYSSSSDDEQRISELNDRELDEIDWQAAD-QDVENALKDLSDD 635
Query: 471 SDLETKTI 494
+D +T +I
Sbjct: 636 NDFDTGSI 643
>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = +1
Query: 109 SRTSSLGLXHIISKPSGCQLVPATYKXTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTES 288
S+ SS G SKP + A + YG Q +S KN N E+
Sbjct: 147 SKQSSTGTQEESSKPEKSNKLLAKSTLSLYGNQAFNPSSVLPSNSSSTPKENKKNVNKET 206
Query: 289 HMRSTQKLTMVKIQFSSV 342
+ +T + + +K SV
Sbjct: 207 YQPNTFRRSPLKNDTGSV 224
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 624 TGFDKSAFDVSQYDCDDENVEEHTLQSETVTKFLMFMDPENDKHVNHVFNS 776
TGF+ +++ + DD NV++ E+V MFMD N +N V S
Sbjct: 1011 TGFELTSYVNALSKKDDINVQKTENVDESVGLNAMFMDNVNQDSLNSVDQS 1061
>SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 490 VLVSKSLSSATNLMVFSTVCESGPTYSNLSVSGKITFKSNILSSDPSN 347
++ +K++ TN F +VCE Y NL KI ++ S P N
Sbjct: 125 LIYAKTIHIITNPKTFVSVCEELAKYGNLKNRPKIVWEPTPESCLPEN 172
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.6 bits (56), Expect = 4.1
Identities = 34/114 (29%), Positives = 48/114 (42%)
Frame = -3
Query: 715 VTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL*FLTSYLTGC 536
VT+S +ST S S TS + +++P SQIS S SP+S+ F S
Sbjct: 121 VTLSCGQAFTSTVDISSS---TSSSVINSPTGTAVSSQISTLSMSPSSTPVFSPS----- 172
Query: 535 QLLFFSS*VAQIVFIVLVSKSLSSATNLMVFSTVCESGPTYSNLSVSGKITFKS 374
SS VA V V S SS++ V T + P S+ ++ S
Sbjct: 173 --ASVSSKVASSVSYVSSEPSDSSSSTNTVILTTSVNSPAVSSSETLTSVSITS 224
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 375 DLKVILPETDKFEYVGPDSQTVENTIKFVAEDSDLET 485
DL I P T Y+ QTV NT D D++T
Sbjct: 954 DLTTIDPTTFTSTYLSSGFQTVSNTTATSGSDDDVKT 990
>SPBC30D10.14 |||dienelactone hydrolase family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 682 TFSSSQSYWLTSKADLSNP 626
TFS W+ ++ADLSNP
Sbjct: 210 TFSDMFHGWMAARADLSNP 228
>SPBC1685.03 |sec11||signal peptidase subunit Sec11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 189
Score = 25.4 bits (53), Expect = 9.4
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -3
Query: 535 QLLFFSS*VAQIVFIVLVSKSLSSATNLMVFSTVCESGPTYSNLSVSGKITF-KSNILSS 359
Q L F +AQI+ ++LV S + F T CES P LS S + +F + ++L
Sbjct: 2 QKLSFRQGLAQILNLLLVLSSAYMGYKTLSFVTDCES-PVVVVLSESMEPSFQRGDLLFL 60
Query: 358 DPSN 347
D N
Sbjct: 61 DNRN 64
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 25.4 bits (53), Expect = 9.4
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 315 DGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEY-VGPDSQTVENTIKFVAEDSDLETKT 491
D E+ I + + + N+ + KVI + + Y +GP+ ++NTIK +D +T+T
Sbjct: 937 DVENAIKEISAIAEEVKNLVE-KVIKIDREYHRYLIGPNGSKLQNTIKECGGSTD-KTET 994
Query: 492 IKTI 503
+ I
Sbjct: 995 ARLI 998
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 439 TVCESGPTYSNLSVSGKITFKS-NILSSDPSNTLHL 335
T+ G Y N+ S + T N+L+SDP NT+++
Sbjct: 690 TISTWGSQYHNVMTSLQRTINLLNMLTSDPKNTVYV 725
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,124,031
Number of Sequences: 5004
Number of extensions: 64064
Number of successful extensions: 223
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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