Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_I04
         (819 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56965-2|AAB52667.3|  581|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AL117195-2|CAB60773.1|  245|Caenorhabditis elegans Hypothetical ...    29   5.3  

>U56965-2|AAB52667.3|  581|Caenorhabditis elegans Hypothetical
           protein C15H9.5 protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 149 ILYSLLKICLSHITCRRHKNNYFLAGFLVAFLVRTFFAAALGIFF 15
           ILY  L +  SH+ CR +  N +     +A LV   F  AL +FF
Sbjct: 266 ILYFGLAVYWSHLLCRSNSENIYRVHKFMAVLV---FLKALSVFF 307


>AL117195-2|CAB60773.1|  245|Caenorhabditis elegans Hypothetical
           protein Y57A10A.3 protein.
          Length = 245

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -2

Query: 437 RIPYCFLFVRNPNIYIISVVFISMVLWVA 351
           +I +CF F + PN+   SV+F S+++ +A
Sbjct: 206 KISHCFFFAKLPNLLYFSVIF-SLIIVIA 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,398,395
Number of Sequences: 27780
Number of extensions: 345559
Number of successful extensions: 927
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)