Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_H14
         (820 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p pro...   178   6e-45
AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.     178   6e-45
AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-li...   178   6e-45
AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA...   178   6e-45
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    30   4.4  
AY118950-1|AAM50810.1|  422|Drosophila melanogaster LD33701p pro...    29   7.6  
AE014297-3299|AAF56116.2|  424|Drosophila melanogaster CG4449-PA...    29   7.6  

>AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p
           protein.
          Length = 90

 Score =  178 bits (434), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
 Frame = +3

Query: 132 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 308
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 309 PINENDTPTSLEMEEGDTIEVYQQQTGG 392
           PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.
          Length = 90

 Score =  178 bits (434), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
 Frame = +3

Query: 132 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 308
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 309 PINENDTPTSLEMEEGDTIEVYQQQTGG 392
           PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-like
           protein SMT3 protein.
          Length = 90

 Score =  178 bits (434), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
 Frame = +3

Query: 132 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 308
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 309 PINENDTPTSLEMEEGDTIEVYQQQTGG 392
           PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA
           protein.
          Length = 90

 Score =  178 bits (434), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
 Frame = +3

Query: 132 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 308
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 309 PINENDTPTSLEMEEGDTIEVYQQQTGG 392
           PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
            isoform A protein.
          Length = 2190

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = -1

Query: 640  EVTYSIWYTYNLPYHKLFETHNALRSSAMLLCVTKLLPNTFTDTNDVSLKLT*G*SLRRV 461
            ++ YS+    N+       T +   SS  +   T +  +TF+ T  +++  T   S R +
Sbjct: 1737 DLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREI 1796

Query: 460  HLIDFDPLEMVNP 422
             +  F+ +E +NP
Sbjct: 1797 TVFQFNDVENINP 1809


>AY118950-1|AAM50810.1|  422|Drosophila melanogaster LD33701p
           protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 279 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 371
           + ++  FDG  ++ NDTP + +ME  + I++
Sbjct: 388 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 418


>AE014297-3299|AAF56116.2|  424|Drosophila melanogaster CG4449-PA
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 279 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 371
           + ++  FDG  ++ NDTP + +ME  + I++
Sbjct: 390 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,956,918
Number of Sequences: 53049
Number of extensions: 653162
Number of successful extensions: 1271
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)