Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G22
         (635 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1165 + 31423674-31423881,31424073-31424200,31424996-314251...    29   3.1  
03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169     29   3.1  
01_01_0891 + 7023383-7023700,7024627-7024705,7024888-7024951,702...    29   4.1  
05_03_0577 + 15671570-15672432,15672571-15672785,15672825-156729...    28   7.1  
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817           27   9.4  
06_03_0316 - 19491636-19491649,19491880-19492056,19493463-194937...    27   9.4  

>04_04_1165 +
           31423674-31423881,31424073-31424200,31424996-31425100,
           31425350-31425442,31425904-31425978,31426284-31426346,
           31426537-31426646,31426810-31426817,31426831-31426997
          Length = 318

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 514 PASQYDVSAALRPPSRHDASRGADGSPS*YDESXPIWR 627
           PA  + +S  LRPP+   A+   +GSPS  ++S  + R
Sbjct: 36  PARPHGLSLHLRPPAMASAAAAGNGSPSAPEDSTALSR 73


>03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169
          Length = 515

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 307 SGPWELQKPWSRPPAWLDERSA 372
           S PWEL K  + P  WLD+ S+
Sbjct: 239 SSPWELTKTANLPNQWLDDESS 260


>01_01_0891 +
           7023383-7023700,7024627-7024705,7024888-7024951,
           7025324-7025401,7025513-7025708,7025895-7025963,
           7026115-7026254,7026425-7026547,7027390-7027582,
           7028872-7029034,7029433-7029476,7029683-7029724
          Length = 502

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 334 WSRPPAWLDERSAAAYAISWTRLRTHRTSNAR 429
           W R   W DE   A YA    R+R    S AR
Sbjct: 410 WVRRGRWFDEEGRAVYAAEADRIRNWAESRAR 441


>05_03_0577 +
           15671570-15672432,15672571-15672785,15672825-15672954,
           15672990-15673794,15674505-15674715,15674829-15675436
          Length = 943

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 514 PASQYDVSAALRPPSRHDASRGADGSPS*YDES 612
           PA + + SA  +PPS     +G+  S S +DES
Sbjct: 651 PAKKLEQSAQKKPPSAPKPRKGSSSSSSHHDES 683


>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
          Length = 958

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 337 SRPPAWLDERSAAAYAISWTRLRTHRT-SNARTRLL-QGTGRTPFRT 471
           S P AW   RS  +    W R R +R+ S +R+R + +G GR+  R+
Sbjct: 162 SGPDAWKRSRSPLSPRGGWNRSRRNRSRSRSRSRSIGRGRGRSRSRS 208


>06_03_0316 -
           19491636-19491649,19491880-19492056,19493463-19493736,
           19493814-19493962,19494065-19494280,19494390-19494651
          Length = 363

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -3

Query: 114 STCLKQFIT*SNTH*N*VPRAHEN*KSKHGAVKII 10
           S+CLK+F T S  H + + RA    ++KH  V+II
Sbjct: 248 SSCLKRFNTFSWVHNSMLKRALAKLRAKHPGVRII 282


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,265,873
Number of Sequences: 37544
Number of extensions: 262874
Number of successful extensions: 711
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)