Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G18
         (445 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens ...    31   2.4  
AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens ...    29   5.5  
BC117184-1|AAI17185.1| 1388|Homo sapiens retrotransposon gag dom...    29   9.6  
BC113670-1|AAI13671.1| 1388|Homo sapiens retrotransposon gag dom...    29   9.6  
AY121804-1|AAM82752.1| 1388|Homo sapiens BJ-HCC-23 tumor antigen...    29   9.6  
AB037739-1|BAA92556.1| 1418|Homo sapiens KIAA1318 protein protein.     29   9.6  

>AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38312 fis, clone FCBBF3021506. ).
          Length = 134

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 86  CVC-CRKAFGV*VPSCLHRPSCRCIYFTCCV-LCIFRLLTSWLFCLHL 223
           CVC CR    V +  C+  P C C+Y    V +C+  +      C H+
Sbjct: 7   CVCMCRWCLCVCIYMCVCVPVCMCVYVCVYVRICVICVCVCVFVCAHM 54


>AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45585 fis, clone BRTHA3013882. ).
          Length = 201

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +2

Query: 86  CVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLFCLHL 223
           CVC      V +  CLH   C C  F C  LC+   L   + CLHL
Sbjct: 70  CVCLCVCVSVCLCVCLHLCVCVC-GFVCLCLCVCVCLCVCV-CLHL 113


>BC117184-1|AAI17185.1| 1388|Homo sapiens retrotransposon gag domain
            containing 1 protein.
          Length = 1388

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 228  PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTH 115
            P+ C++N++E     + S QQ +  Q    RC  L  H
Sbjct: 1326 PTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEH 1363


>BC113670-1|AAI13671.1| 1388|Homo sapiens retrotransposon gag domain
            containing 1 protein.
          Length = 1388

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 228  PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTH 115
            P+ C++N++E     + S QQ +  Q    RC  L  H
Sbjct: 1326 PTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEH 1363


>AY121804-1|AAM82752.1| 1388|Homo sapiens BJ-HCC-23 tumor antigen
            protein.
          Length = 1388

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 228  PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTH 115
            P+ C++N++E     + S QQ +  Q    RC  L  H
Sbjct: 1326 PTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEH 1363


>AB037739-1|BAA92556.1| 1418|Homo sapiens KIAA1318 protein protein.
          Length = 1418

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 228  PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTH 115
            P+ C++N++E     + S QQ +  Q    RC  L  H
Sbjct: 1356 PTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEH 1393


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,444,024
Number of Sequences: 237096
Number of extensions: 721664
Number of successful extensions: 2075
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2074
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)