Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G15
         (582 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504...    28   6.2  
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623...    27   8.2  

>12_01_0612 -
           5044639-5044858,5045010-5045167,5045440-5045684,
           5046006-5046294,5047540-5048561,5049320-5049389
          Length = 667

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 339 IVWPVIWIGGANKNVLIY 392
           IVWP +W G  NK +L Y
Sbjct: 359 IVWPPVWKGMGNKELLSY 376


>08_01_0706 -
           6235817-6235988,6236028-6236338,6236421-6236627,
           6236718-6236889,6236994-6237249,6238015-6238073,
           6238693-6238782,6238869-6239013,6239598-6239712,
           6240690-6240701
          Length = 512

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 10  FXFAGSLSGYSGYVWTGR*AHWFNLRIFANTSCSKSIASQ 129
           + F     G +G +W GR    ++  +FA TS S  IAS+
Sbjct: 388 YSFVNCSIGGTGRIWLGRAWRPYSTVVFAYTSMSDIIASE 427


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,441,659
Number of Sequences: 37544
Number of extensions: 240892
Number of successful extensions: 392
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)