Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G15
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z37983-2|CAA86055.1|  585|Caenorhabditis elegans Hypothetical pr...    28   4.2  
U28944-12|AAA68371.2|  363|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z81489-2|CAB04011.2|  360|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U97002-11|AAY86259.1|  121|Caenorhabditis elegans Hypothetical p...    27   9.7  
AF016423-8|AAB65319.1|  409|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical
           protein F54B8.8 protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -1

Query: 543 YTLYCYK*LVHIAFKSGLFLLYSTFTITLLFFYPFQNFLA 424
           Y+++C K   +I FK+ L L+Y  F +  LF++  + F++
Sbjct: 28  YSIFCKK---NIPFKTELALVYCRFAVDTLFYFLCEFFVS 64


>Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical
           protein R05H5.6 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -1

Query: 279 LIFKLKCMYS*DILKFKYISGFSTLLIHFLWNIYCVLF 166
           +IFKL+     D +KF YI  F+ +LI  L N  CV+F
Sbjct: 38  IIFKLRVCTFNDNIKFLYIVYFTQILISVLNN--CVVF 73


>Z37983-2|CAA86055.1|  585|Caenorhabditis elegans Hypothetical
           protein B0393.2 protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 165 HAQKPKANRR*ILRSNAFATTSVSKYSQVEPVSSPTRPDVA 43
           H + PK N + +++SN F+  +V+  S       P RP  A
Sbjct: 373 HYRNPKKNAKPMIKSNNFSHITVAGSSHPNRTQRPQRPPAA 413


>U28944-12|AAA68371.2|  363|Caenorhabditis elegans Hypothetical
           protein C18A3.2 protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 233 SNTSLDFLRC*FTFCGIFIASC 168
           S TS+ FL C    CG+FIA+C
Sbjct: 37  SKTSISFLGC--ASCGVFIATC 56


>Z81489-2|CAB04011.2|  360|Caenorhabditis elegans Hypothetical
           protein C55A1.3 protein.
          Length = 360

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 243 ILKFKYISGFSTLLIHFLWNIYCVLFH 163
           +LK   + GF TL I  +W+  C+LFH
Sbjct: 142 LLKVISLIGF-TLCIGVVWSFLCILFH 167


>U97002-11|AAY86259.1|  121|Caenorhabditis elegans Hypothetical
           protein K09H11.11 protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 169 VPCAKAKSEPAVNSAKQCFCY 107
           +P A+AKSE A N  ++CF Y
Sbjct: 60  LPKARAKSESAFNRLRKCFKY 80


>AF016423-8|AAB65319.1|  409|Caenorhabditis elegans Hypothetical
           protein F40A3.7 protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -2

Query: 575 YNYHFYLF--HQSIHFIVTNNWCTS 507
           +N++F  F  H  +H I   NWC+S
Sbjct: 89  FNWYFRWFYLHSKVHLISLANWCSS 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,334,485
Number of Sequences: 27780
Number of extensions: 240735
Number of successful extensions: 513
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)