Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G12
         (794 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   6.2  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   6.2  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   8.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   8.2  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +2

Query: 8   KFTCQIXI-VSLHVLFLISVKIV 73
           K T  I I +SLHV FL+ V+I+
Sbjct: 274 KVTLSISILISLHVFFLLVVEII 296


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +2

Query: 8   KFTCQIXI-VSLHVLFLISVKIV 73
           K T  I I +SLHV FL+ V+I+
Sbjct: 274 KVTLSISILISLHVFFLLVVEII 296


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = -3

Query: 594 QTQQYVDFLHHSLFFPHTKNQHQGVY*SQQFFQ---SENLVSLHLLLYQPIH 448
           Q QQ    LHHS    H + QHQ    S  F      +N    +LLL+  +H
Sbjct: 65  QQQQQQQQLHHSPHQYHQQVQHQPQPPSTPFANVSTGQNESLANLLLHPGVH 116


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = -3

Query: 594 QTQQYVDFLHHSLFFPHTKNQHQGVY*SQQFFQ---SENLVSLHLLLYQPIH 448
           Q QQ    LHHS    H + QHQ    S  F      +N    +LLL+  +H
Sbjct: 66  QQQQQQQQLHHSPHQYHQQVQHQPQPPSTPFANVSTGQNESLANLLLHPGVH 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,039
Number of Sequences: 2352
Number of extensions: 13338
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)