Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G12
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73427-5|CAA97803.1|  917|Caenorhabditis elegans Hypothetical pr...   155   3e-38
AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical ...    31   0.95 
U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z73427-5|CAA97803.1|  917|Caenorhabditis elegans Hypothetical protein
            F58B3.5 protein.
          Length = 917

 Score =  155 bits (376), Expect = 3e-38
 Identities = 70/110 (63%), Positives = 87/110 (79%)
 Frame = +3

Query: 459  DIAVDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERI 638
            D  +DV +LD R+G+I++  KHPDAD+LYVE+ID GE  PRTVVSGLV HVP+D+M+ R+
Sbjct: 752  DDTIDVGRLDMRVGRIIKCEKHPDADALYVEQIDVGESAPRTVVSGLVRHVPLDQMQNRL 811

Query: 639  VMVLCNLKPVKMRGVTSEAMVMCASSAEKVEVLIPPPDAIPGDLVVCEGY 788
            V+VLCNLKP KMRGV S AMVMCASS +KVE++  P D+ PG  VVC  Y
Sbjct: 812  VVVLCNLKPAKMRGVESRAMVMCASSPDKVEIMEVPADSKPGTPVVCPPY 861


>AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical
           protein Y39A1A.8 protein.
          Length = 225

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 401 LFIDNWFFITNGILNSCNNLGCFQQVCFTRY 309
           LFI       + ++  CN +GCF Q C+  Y
Sbjct: 58  LFIQYGLLKDDDVITYCNGIGCFLQACYLMY 88


>U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical
           protein T10E9.4 protein.
          Length = 649

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 295 FPCDISKPINSAFAAFTFAD 236
           +PCD +KPI S F+ + F D
Sbjct: 471 YPCDANKPIPSQFSTYAFCD 490


>Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical
           protein H12I19.1 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = -1

Query: 635 SFSHFIYW-NMIY*TRHNSTWIFFTTVYFFHIQ-RISIRVFTNLNNF--SNPK 489
           S  ++ +W    Y T + +T IF  T  FF+I   IS+R  TNL +   SNP+
Sbjct: 177 SSGNYQFWLEFSYMTVYFATLIFIFTSAFFYIPIMISVRKLTNLTSAKQSNPE 229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,734,788
Number of Sequences: 27780
Number of extensions: 303764
Number of successful extensions: 819
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)