Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G08
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.39 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.39 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   0.68 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   2.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.1  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   6.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   8.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.4  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 109 YDYVNKYDENNGDKKDSESEDYWGDPENLEKPSYNVNEAPE 231
           Y  +N+Y E    + +  S + W D  N+++ S  +++ P+
Sbjct: 209 YQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEISKLPK 249


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 109 YDYVNKYDENNGDKKDSESEDYWGDPENLEKPSYNVNEAPE 231
           Y  +N+Y E    + +  S + W D  N+++ S  +++ P+
Sbjct: 209 YQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEISKLPK 249


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +1

Query: 274 DESEY--NLRYTYFVQNLKDIIELNAKNKHSSSDINMF---ADYSPSELASLG 417
           DE+ Y  N     F + L  ++EL+  N  +  +INMF    + SP++++ +G
Sbjct: 337 DEAHYASNCLRVQFQKKLL-LVELSWMNDEAQQEINMFLKATEMSPTDISLVG 388


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 70  FIALTICIYEVYSYDYVNKYDENNGDK 150
           FIA  + +  V+   Y  KYD  N D+
Sbjct: 4   FIAFLMLLGAVWCEQYTTKYDNINVDE 30


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 455 KKGPVKLIKYIIKNKSS 505
           K+G  K+I+++IKNK S
Sbjct: 79  KEGVRKVIRHLIKNKPS 95



 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 253 DYQRQYKDESEYNLRYTYFVQ 315
           + Q +Y  + EY  RY +F++
Sbjct: 99  ELQEKYDPKGEYKSRYNHFLE 119


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +1

Query: 37   ITHVCNMNKIIFIALTICIYEVYSYDYVNKYDENNGDKKDSESEDYWGDPENLEKP-SYN 213
            I  V NMN + +    + +      + V K +E   +KKD        + ++ E    ++
Sbjct: 1021 IYSVFNMNNVSWGTREVTVVPKPDPNAVQKIEEKKPEKKDKVLTFLGANAQDDEGGLEFS 1080

Query: 214  VNEAPELFKKFITDYQRQYKDESE 285
            VN   +LFK  I  Y+   K+  +
Sbjct: 1081 VN---KLFKCMICTYKADNKENEQ 1101


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +1

Query: 37   ITHVCNMNKIIFIALTICIYEVYSYDYVNKYDENNGDKKDSESEDYWGDPENLEKP-SYN 213
            I  V NMN + +    + +      + V K +E   +KKD        + ++ E    ++
Sbjct: 1021 IYSVFNMNNVSWGTREVTVVPKPDPNAVQKIEEKKPEKKDKVLTFLGANAQDDEGGLEFS 1080

Query: 214  VNEAPELFKKFITDYQRQYKDESE 285
            VN   +LFK  I  Y+   K+  +
Sbjct: 1081 VN---KLFKCMICTYKADNKENEQ 1101


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -1

Query: 175 NNLQIQNLSYHH-CFHHIY*RNH 110
           NN    N ++HH   HHI+ ++H
Sbjct: 313 NNAATNNQNHHHHAGHHIHAQHH 335


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 455 KKGPVKLIKYIIKNK 499
           K G   +I+Y+IKNK
Sbjct: 81  KDGSRTIIRYLIKNK 95


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 455 KKGPVKLIKYIIKNK 499
           K+G  K+I Y+I NK
Sbjct: 83  KEGSRKIIHYLIDNK 97


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 112 DYVNKYDENNGDKK 153
           D  N  D NNG+KK
Sbjct: 462 DSKNNQDGNNGEKK 475


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 112 DYVNKYDENNGDKK 153
           D  N  D NNG+KK
Sbjct: 354 DSKNNQDGNNGEKK 367


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 355 HSSSDINMFADYSPSE 402
           +S ++IN FA+ SPS+
Sbjct: 59  YSWTEINAFANVSPSK 74


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 130 DENNGDKKDSES 165
           DEN  DKKD +S
Sbjct: 112 DENKLDKKDDDS 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,979
Number of Sequences: 336
Number of extensions: 2053
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)