Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_G08
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0339 + 42848065-42848943,42849308-42849526 38 0.005
04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016 38 0.006
04_01_0548 + 7103540-7103972,7104081-7104667 35 0.033
02_05_0514 + 29686263-29686728,29687078-29687313,29687435-296875... 35 0.033
12_01_1026 - 10525744-10526018,10528104-10528332 33 0.100
04_01_0560 - 7183253-7183839,7183935-7184367 33 0.13
04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753... 31 0.70
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 30 0.93
02_03_0174 + 15991418-15991888,15992007-15992126,15992763-159928... 30 0.93
01_06_1677 + 39092268-39092306,39092395-39092447,39094259-390943... 30 1.2
12_02_0784 - 23130783-23131273,23131701-23131778,23131913-231319... 29 1.6
01_06_1698 - 39264075-39264468,39264545-39264696,39264780-392648... 29 2.8
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 28 3.7
04_03_0505 + 16628145-16628217,16628612-16628767,16628964-166291... 28 3.7
06_03_0496 - 21415596-21416068,21416618-21417224 28 5.0
04_03_0308 + 14182034-14182522,14182632-14182751,14183694-141839... 28 5.0
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148... 27 6.5
03_02_0030 + 5129234-5129568,5130020-5130651,5130936-5131243,513... 27 6.5
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 27 8.7
03_02_0715 + 10621789-10623243,10624074-10625018 27 8.7
>01_07_0339 + 42848065-42848943,42849308-42849526
Length = 365
Score = 37.9 bits (84), Expect = 0.005
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 229 ELFKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSPSEL- 405
ELF+KF+ Y++ Y E R+ F NL I E N K +N FAD + E
Sbjct: 50 ELFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKKITGYWLGLNEFADLTHDEFK 109
Query: 406 -ASLG*RLT 429
A LG LT
Sbjct: 110 AAYLGLTLT 118
>04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016
Length = 336
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 238 KKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSPSELAS 411
++++ Y R YKD++E R+ F N+ I NA N +N FAD + E S
Sbjct: 38 ERWMAQYGRMYKDDAEKARRFEVFKANVAFIESFNAGNHKFWLGVNQFADLTNDEFRS 95
>04_01_0548 + 7103540-7103972,7104081-7104667
Length = 339
Score = 35.1 bits (77), Expect = 0.033
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 238 KKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSPSE 402
++++ Y R Y+D++E R+ F N+ I NA N + +N FAD + E
Sbjct: 38 ERWMAQYGRVYRDDAEKARRFEVFKANVAFIESFNAGNHNFWLGVNQFADLTNDE 92
>02_05_0514 +
29686263-29686728,29687078-29687313,29687435-29687575,
29687685-29687915
Length = 357
Score = 35.1 bits (77), Expect = 0.033
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 217 NEAPELFKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSP 396
N+ LF + + + Y E RY F +NL+ I+E N +N +N FAD +
Sbjct: 40 NKLVGLFTSWSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRRNGSYWLGLNHFADIAH 99
Query: 397 SE 402
E
Sbjct: 100 EE 101
>12_01_1026 - 10525744-10526018,10528104-10528332
Length = 167
Score = 33.5 bits (73), Expect = 0.100
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 271 KDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSPSELASL 414
+D + R+ YF IIE N K + +N+F D +P E + L
Sbjct: 111 RDRDDMVRRFVYFKDRAHKIIEFNKSGKSYTWGLNIFGDMTPQEQSEL 158
>04_01_0560 - 7183253-7183839,7183935-7184367
Length = 339
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 238 KKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSPSE 402
++++ Y R YKD +E R+ F N+ I NA N +N FAD + E
Sbjct: 38 ERWMEQYGRVYKDATEKARRFEIFKANVAFIESFNAGNHKFWLGVNQFADLTNYE 92
>04_04_0674 +
27173948-27174188,27174704-27175260,27175310-27175399,
27175475-27175714,27175801-27176022,27176124-27176433,
27176528-27176847,27176906-27177021,27177133-27177227,
27177331-27177407,27177520-27177615
Length = 787
Score = 30.7 bits (66), Expect = 0.70
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 127 YDENNGDKKDSESEDYWGDPENLEKPSYNVNEAPELFKKFITDYQRQYKDESEYNLRYT 303
+ E+ G K++ ED E ++P Y A + +K + Y+ QY+D E + YT
Sbjct: 78 HGEDEGTTKETYEEDKGERLEFEDEPEYEEEAAVDYDEKDLEQYEEQYEDGDEV-VEYT 135
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 30.3 bits (65), Expect = 0.93
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 220 EAPELFKKFITDYQRQYKDESEYNLRYTYFVQNLK 324
EA E+F KF + ++D ++Y++ +TY N++
Sbjct: 322 EADEIFLKFDNQFHLAHRDRNQYDVSFTYNRLNMR 356
>02_03_0174 +
15991418-15991888,15992007-15992126,15992763-15992801,
15994032-15994275,15994388-15994674
Length = 386
Score = 30.3 bits (65), Expect = 0.93
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 235 FKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSPSE 402
F F+ + + Y+D E+ R + F NL+ + + + F+D +P+E
Sbjct: 50 FASFVQRFGKSYRDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKFSDLTPAE 105
>01_06_1677 +
39092268-39092306,39092395-39092447,39094259-39094350,
39094435-39094646,39095196-39095207
Length = 135
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 187 ENLEKPSYNVNEAPEL-FKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAK 348
E +K S + +A ++ F++++ + R YKDE+E R+ F ++ + + NA+
Sbjct: 77 EGSKKVSEDEEQALKVRFQEWMNKFNRNYKDEAEKAYRFEVFKSTVQYVEKFNAE 131
>12_02_0784 -
23130783-23131273,23131701-23131778,23131913-23131969,
23132062-23132116,23132738-23133010
Length = 317
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 130 DENNGDKKDSESEDYWGDPENLEKPSYNVNEAPEL 234
DE++G K++ E E+ W D +E Y ++ PE+
Sbjct: 251 DEDDG-KEEQEPEEDWDDKGEMENAGYEDDDEPEI 284
>01_06_1698 -
39264075-39264468,39264545-39264696,39264780-39264830,
39264946-39265122,39265256-39265348,39265489-39265555,
39265695-39265768,39266007-39266088,39266182-39266255,
39266354-39266383,39266475-39266534,39267524-39268225
Length = 651
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 97 EVYSYDYVNKYDENNGDKKDSESEDYWGDPENLEK 201
EVY DY YD + K DYWG+P+N EK
Sbjct: 541 EVYGKDY---YDPS----KPMYRYDYWGEPKNTEK 568
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 220 EAPELFKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNA---KNKHS-SSDINMFAD 387
EA L+ ++ ++ + Y E RY F NL+ I E NA HS +N FAD
Sbjct: 35 EARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFAD 94
Query: 388 YSPSE 402
+ E
Sbjct: 95 LTNEE 99
>04_03_0505 +
16628145-16628217,16628612-16628767,16628964-16629125,
16629699-16629842,16629952-16630028,16630710-16630874,
16630988-16631341
Length = 376
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 157 SESEDYWGDPENLEKPSYNVNEAPELFKKFITDYQRQYKDESEYNLRYTYFVQNL 321
+E+ +P+N K Y + P L KKF+ Q KD S N++ V N+
Sbjct: 140 NETNSLAENPKNDTKKKYYLMWTPHLQKKFLHALQILGKDASPKNIKKIMGVDNI 194
>06_03_0496 - 21415596-21416068,21416618-21417224
Length = 359
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 130 DENNGDKKDSESEDYWGDPENLEKPSYNVNEAPELFKKFITDYQRQYKDESE 285
++N+GD+KD ED D E+ + VNE E ++ + + ++ D+ +
Sbjct: 309 NKNSGDEKDEGDED---DEEDETLSGFIVNEEDEPMEELSEEEEDEFDDDDD 357
>04_03_0308 +
14182034-14182522,14182632-14182751,14183694-14183937,
14184020-14184312
Length = 381
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 220 EAPELFKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSPS 399
+A F F + R Y+D E R + F NL+ + ++ + F+D +P
Sbjct: 53 DAEAHFASFERRFGRTYRDAGERAYRMSVFAANLRRARRHQRLDPTATHGVTKFSDLTPG 112
Query: 400 E 402
E
Sbjct: 113 E 113
>03_05_0377 +
23613181-23613342,23614469-23614501,23614606-23614879,
23615105-23615585,23616174-23616846
Length = 540
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = +1
Query: 121 NKYDENNGDKKDSESED------YWGDPENLEKPSYNVNE 222
N+Y E NGDK D+ + YW D N+ SY V +
Sbjct: 339 NRYKEENGDKVDTSRQQMQRYTHYW-DRYNIHAGSYKVEQ 377
>03_02_0030 +
5129234-5129568,5130020-5130651,5130936-5131243,
5131396-5131504,5131871-5131956,5132173-5132232,
5133164-5133340,5133742-5133780
Length = 581
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = +1
Query: 103 YSYDYVNKYDENNGDKKD------SESEDYWGDPENLEKPSYN 213
+ Y +++++ N+GDKKD S +Y G P +LE N
Sbjct: 176 HRYPFLSRFRSNSGDKKDTSHYVSSMDSEYEGTPVSLESSIAN 218
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 151 KDSESEDYWGDPENLEKPSYNV 216
+DS SED + DPE +E S NV
Sbjct: 346 EDSSSEDLYMDPEEIEYYSLNV 367
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 109 YDYVNKYDENNGDKKDSESEDYWGDPENLEKPSYNVNEAP 228
Y+ + Y E D+ D ED + E+LE+ +EAP
Sbjct: 106 YEDDDDYSEEEDDRVDEYGEDLEEEEEDLEEEEEEDDEAP 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,721,636
Number of Sequences: 37544
Number of extensions: 186524
Number of successful extensions: 581
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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