Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_G08
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 40 8e-04
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 40 8e-04
AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 33 0.090
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 30 0.84
AL021472-3|CAA16300.1| 259|Caenorhabditis elegans Hypothetical ... 29 1.5
AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine r... 29 1.5
U97193-13|AAO38676.1| 215|Caenorhabditis elegans Hypothetical p... 29 1.9
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 29 1.9
AF067211-4|AAC16995.1| 532|Caenorhabditis elegans Hypothetical ... 29 2.6
U28940-2|AAD31558.1| 239|Caenorhabditis elegans Transbilayer am... 28 3.4
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 28 3.4
Z74040-2|CAA98513.1| 287|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z68159-11|CAI79134.1| 117|Caenorhabditis elegans Hypothetical p... 28 4.5
U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical p... 27 5.9
AF039048-1|AAB94237.2| 480|Caenorhabditis elegans Cell division... 27 5.9
Z81593-4|CAB04742.1| 334|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 27 7.8
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +1
Query: 235 FKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSD----INMFADYSPSE 402
F+ F Y R+YKDESE R+ FV++ ++ +LNAK+K + D IN F+D S +E
Sbjct: 43 FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAE 102
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +1
Query: 235 FKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSD----INMFADYSPSE 402
F+ FI Y+R YKDE E R+ FV + ++N K + D IN F+D S E
Sbjct: 47 FEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106
Query: 403 L 405
+
Sbjct: 107 I 107
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 40.3 bits (90), Expect = 8e-04
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 229 ELFKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHSSSDINMFADYSPSELA 408
++F FI + R+Y E+ RY F++N+ + +N D+N F D++ EL
Sbjct: 80 QMFNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139
Query: 409 SL 414
+
Sbjct: 140 KM 141
>AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.10 protein.
Length = 343
Score = 33.5 bits (73), Expect = 0.090
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 235 FKKFITDYQRQYKDESEYNLRYTYFVQNLKDIIELNAKNKHS--SSDINMFADYSPSE 402
F+ F+ Y R+Y +E E R+T F +NL D++E K + ++N F+D + E
Sbjct: 51 FQNFLVKYLREYPNEYEIVKRFTIFSRNL-DLVERYNKEDAGKVTYELNDFSDLTEEE 107
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 256 YQRQYKDESEYNLRYTYFVQNLKDIIELNAK 348
Y+R++ DE+EY R+ F +NLK I+ N K
Sbjct: 644 YERRFIDENEYTERHLKFAENLK-ILTANYK 673
>AL021472-3|CAA16300.1| 259|Caenorhabditis elegans Hypothetical
protein Y17D7B.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 163 SEDYWGDPENLEKPSYNVNEAPELF-KKFITDYQR 264
S++ W +P +E SYN+ + P+ + K+F DY++
Sbjct: 146 SKNVWSEPGAMEIISYNIVQEPKNYRKRFAHDYRK 180
>AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine
receptor, class z protein83 protein.
Length = 314
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = -2
Query: 495 FLMMYLINFTGPFFTAVSAFESCQSLSEXXXXXXXXXREHVYIR*GMFVFSVQFNNVLQV 316
FL++ LI F PF+ + + E V + +FVFS+ + +L V
Sbjct: 29 FLLINLIIF--PFYKYLYEINRDRDKKMLLFPTVQHFYEMVQLAYFLFVFSIILHTLLHV 86
Query: 315 LHEVSVTQIVFGLIF 271
+HE+ + + + +IF
Sbjct: 87 IHEIVIIRFLIVVIF 101
>U97193-13|AAO38676.1| 215|Caenorhabditis elegans Hypothetical
protein C06A5.8b protein.
Length = 215
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 100 VYSYDYVNKYDENNGDKKDSESEDYWGDPENLEKP 204
VY D YDE D+ + E+ED E EKP
Sbjct: 117 VYEADLEYSYDEEESDEDEEENEDEEDVEEEEEKP 151
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 100 VYSYDYVNKYDENNGDKKDSESEDYWGDPENLEKP 204
VY D YDE D+ + E+ED E EKP
Sbjct: 185 VYEADLEYSYDEEESDEDEEENEDEEDVEEEEEKP 219
>AF067211-4|AAC16995.1| 532|Caenorhabditis elegans Hypothetical
protein B0205.9 protein.
Length = 532
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 193 LEKPSYNVNEAPELFKKFITDYQRQYKDESEYNLRYTYFVQNLKDII-ELN 342
L K + N E P FK+ +Y R D S Y++ Y F L I+ ELN
Sbjct: 14 LVKKTKNAAE-PTTFKEIFDEYSRLDPDRSTYSMCYDKFHHRLAPIMNELN 63
>U28940-2|AAD31558.1| 239|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform c protein.
Length = 239
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 100 VYSYDYVNKYDENNGDKK-DSESEDYWGDPENLEKPSYNVNE 222
V Y ++K + K+ DS ED +PE E+P+ NE
Sbjct: 197 VKDYQSIDKLESEAAKKRFDSSEEDSESEPEGAEEPATEENE 238
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 100 VYSYDYVNKYDENNGDKK-DSESEDYWGDPENLEKPSYNVNE 222
V Y ++K + K+ DS ED +PE E+P+ NE
Sbjct: 1412 VKDYQSIDKLESEAAKKRFDSSEEDSESEPEGAEEPATEENE 1453
>Z74040-2|CAA98513.1| 287|Caenorhabditis elegans Hypothetical
protein K10D6.2b protein.
Length = 287
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +1
Query: 82 TICIYEVYSYDYVNKYDENNGDKKDSESEDYWGDPENLEKPSYNVNEAPE------LFKK 243
T+C + + Y GD++D E+ + + + + +VNE P L K
Sbjct: 198 TLCWIGAFVCTLLTTYKFVTGDEEDGSKENLFTWQQQTQPVTLSVNELPYRREEPLLHDK 257
Query: 244 FITDYQRQYKDESEYNLRYTYFVQ 315
F++ Q Y+ + R T Q
Sbjct: 258 FVSSQQAGYRPNPQVPYRTTSITQ 281
>Z68159-11|CAI79134.1| 117|Caenorhabditis elegans Hypothetical
protein C33D9.10 protein.
Length = 117
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/75 (21%), Positives = 36/75 (48%)
Frame = +1
Query: 97 EVYSYDYVNKYDENNGDKKDSESEDYWGDPENLEKPSYNVNEAPELFKKFITDYQRQYKD 276
++ + ++ NK ++ + D+K +E ++Y LEK + + L + + Q
Sbjct: 31 DLENQNHKNKMNDLSPDEKKAEIKEYRETDLRLEKQLKSPIKETRLLNRTMMARVEQIDK 90
Query: 277 ESEYNLRYTYFVQNL 321
E N + +Y++Q L
Sbjct: 91 NEEANAKKSYWIQKL 105
>U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical
protein C33F10.13 protein.
Length = 363
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 187 PDHPNNLQIQNLSYHHCFHHIY*RNHTNKL 98
P+ ++ ++ L C HHI+ HTNK+
Sbjct: 120 PEDESSWEMPQLGPKECIHHIFKLFHTNKI 149
>AF039048-1|AAB94237.2| 480|Caenorhabditis elegans Cell division
cycle related protein25.2 protein.
Length = 480
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 205 MAFLNFPDHPNNLQIQNLSYHHCFHHIY*RNHTNKLRKY 89
+ + NF N I NL H + ++ + HT +L+KY
Sbjct: 335 LGYRNFFFAANEANITNLCQPHAYCEMHDKEHTMELKKY 373
>Z81593-4|CAB04742.1| 334|Caenorhabditis elegans Hypothetical
protein T20B3.4 protein.
Length = 334
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = -2
Query: 306 VSVTQIVFGLIFVLPLVVSNKFLEQFRGFVYIVRWL 199
VS+T + +FVL V+S+K L++FR +YI+ ++
Sbjct: 113 VSITIVFENRLFVL--VLSDKTLQRFRTPIYILHYI 146
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 124 KYDENNGDKKDSESEDYWGDPENLEKPSYNVNEAPELFKKFITDYQRQYK 273
K +E +KK+ + ED + E E+P ++ P F D Q Q K
Sbjct: 163 KKEEKKEEKKEEKKEDEKKEDEKKEEPKPHITIDPPGDLMFKADQQEQKK 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,094,482
Number of Sequences: 27780
Number of extensions: 195686
Number of successful extensions: 803
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -