Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G02
         (799 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7S1R5 Cluster: Putative uncharacterized protein NCU098...    34   4.8  
UniRef50_A3ILA0 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q8T7L8 Cluster: Seroin 1; n=1; Bombyx mori|Rep: Seroin ...    33   6.3  

>UniRef50_Q7S1R5 Cluster: Putative uncharacterized protein
           NCU09827.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU09827.1 - Neurospora crassa
          Length = 532

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 235 DWEKVHELINSKLNENDSWKPVSAGSVKSLKPIPGGHVYGESEY 366
           DW+KV EL+     E   W+       +S  P   G V+GE+E+
Sbjct: 362 DWDKVEELVEEVKEEEGEWEDSFVLERQSEDPDSEGQVHGEAEF 405


>UniRef50_A3ILA0 Cluster: Putative uncharacterized protein; n=1;
           Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
           protein - Cyanothece sp. CCY 0110
          Length = 791

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +1

Query: 340 GHVY-----GESEYTFHSSSDINGQKTDKSGGHKIINDDGKVYEFDFNPKVKGY 486
           GHV+     G S    HS+SD   +   K G + IIN +G +Y  DF+ K K Y
Sbjct: 68  GHVFIVGAVGYSGSPKHSNSDYVVEPA-KEGWNAIINGEGMIYRLDFHEKGKAY 120


>UniRef50_Q8T7L8 Cluster: Seroin 1; n=1; Bombyx mori|Rep: Seroin 1 -
           Bombyx mori (Silk moth)
          Length = 108

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +1

Query: 352 GESEYTFHSSSDINGQKTDKSGGHKIINDDGKVYE 456
           GES+ ++ SSS +NG KT  SGG   + +DGK  E
Sbjct: 65  GESKSSYSSSSTVNG-KTVSSGGVSELTNDGKAVE 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,392,487
Number of Sequences: 1657284
Number of extensions: 13629398
Number of successful extensions: 36134
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36089
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)