Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_G02
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    29   0.057
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   1.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   1.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   6.5  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.6  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 0.057
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = +1

Query: 223 ASSGDWEKVHELIN-SKLNENDSWKPVSAGSVKSLKPIPGGHVYGESEYTFHSSSDINGQ 399
           +SSG +  +   I+ SK    D W    +G+V  L P PG   +    YT  S    NG 
Sbjct: 83  SSSGPFSSIGGGISASKRQRTDDWLSSPSGNVPPLTPSPGPPSH---PYTVIS----NGY 135

Query: 400 KTD-KSGGHKIINDDGKVYEFDFNP-KVKGY 486
            +   SG +   + +GK+   D +P  + GY
Sbjct: 136 SSPMSSGSYDPYSPNGKIGREDLSPSSLNGY 166


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 150 CNSAHRGFRSSGPKFSNR 203
           CN  H   R  GP+F  R
Sbjct: 330 CNEGHHATRKMGPEFRER 347


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 150 CNSAHRGFRSSGPKFSNR 203
           CN  H   R  GP+F  R
Sbjct: 330 CNEGHHATRKMGPEFRER 347


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 398 RRPTKAEVTKLSTMTEKSTSS 460
           RR  K E+T+ ST +   TSS
Sbjct: 376 RRKDKREITRKSTSSSTHTSS 396


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 198 WKTWDRLNGNHDEHCYKNQLH 136
           W     L G  DE  YK++LH
Sbjct: 462 WYVPKSLRGRKDEADYKDKLH 482


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 374 IHRQTSTDRRPTKAEV 421
           IH +T TD RP   ++
Sbjct: 97  IHERTHTDERPYSCDI 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,569
Number of Sequences: 336
Number of extensions: 3684
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)