Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_F23
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73427-7|CAA97799.1|  371|Caenorhabditis elegans Hypothetical pr...    38   0.010
Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z81084-3|CAB03108.1|  174|Caenorhabditis elegans Hypothetical pr...    32   0.38 
AF440506-1|AAL34094.1|  174|Caenorhabditis elegans SKR-2 protein.      32   0.38 
AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical...    32   0.50 
AL034393-25|CAI59120.1|  797|Caenorhabditis elegans Hypothetical...    32   0.50 
AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical...    32   0.50 
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    29   3.5  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    29   3.5  
Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical...    29   4.6  
Z81127-1|CAB03386.1|  325|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AF025467-9|AAB71041.2|  228|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z73427-7|CAA97799.1|  371|Caenorhabditis elegans Hypothetical
           protein F58B3.7 protein.
          Length = 371

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +2

Query: 473 STQVLTPVIDLKSKSKDEDESNPSSPKIQ--PKTITASLNVRDFDWNVANEYDPMWPNDY 646
           ST+  T    + SKS     +NP S  I   PK  T    +   + +V  EY PM PN+Y
Sbjct: 63  STRNRTITTAVTSKSFQPIRANPVSDNISFLPKAATDESVMLFGEEHVKCEYYPMTPNNY 122

Query: 647 EKVAKELQAKR 679
           E VAKE+  ++
Sbjct: 123 EVVAKEINDRK 133


>Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical
           protein K08G2.7 protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -1

Query: 190 WLKVMICFLHNIIFTSFLYFYLKPQLVSSVAHDFGFFKILNYLIIFMYYLFHLH 29
           ++K+    L  IIF  +LYF  +P L+   AH     K LNY  I MY+ F  H
Sbjct: 142 YVKITPTTLQWIIFIEYLYFLAEPLLLVYFAH-ISNLKHLNYQ-IDMYFFFGEH 193


>Z81084-3|CAB03108.1|  174|Caenorhabditis elegans Hypothetical
           protein F46A9.4 protein.
          Length = 174

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = +2

Query: 455 REALRRSTQVLTPVIDLKSKSKDEDESNPSSPKIQPKTITASLNVRDFDWNVANEYDPMW 634
           R  +R S  + T ++DL     D+DE   + P I  + +TAS+  +  +W   ++ DP+ 
Sbjct: 30  RNVIRLSNTLNTLLVDL---GLDDDEGTNAEP-IPVQNVTASILKKVINWCTKHQSDPIP 85

Query: 635 PNDYEK 652
             D EK
Sbjct: 86  TEDSEK 91


>AF440506-1|AAL34094.1|  174|Caenorhabditis elegans SKR-2 protein.
          Length = 174

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = +2

Query: 455 REALRRSTQVLTPVIDLKSKSKDEDESNPSSPKIQPKTITASLNVRDFDWNVANEYDPMW 634
           R  +R S  + T ++DL     D+DE   + P I  + +TAS+  +  +W   ++ DP+ 
Sbjct: 30  RNVIRLSNTLNTLLVDL---GLDDDEGTNAEP-IPVQNVTASILKKVINWCTKHQSDPIP 85

Query: 635 PNDYEK 652
             D EK
Sbjct: 86  TEDSEK 91


>AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7c protein.
          Length = 936

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 503 LKSKSKDEDESNPSSP--KIQPKTITASLNVRDFDWNVANEYDPMWPNDYEKV 655
           LK+   DE+  N +    K+  K    S+      WN+A+EYD MWP   + +
Sbjct: 715 LKNVETDEEMFNCARTMRKLSQKHANYSIITYSPLWNIADEYDIMWPQTMQDI 767


>AL034393-25|CAI59120.1|  797|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7b protein.
          Length = 797

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 503 LKSKSKDEDESNPSSP--KIQPKTITASLNVRDFDWNVANEYDPMWPNDYEKV 655
           LK+   DE+  N +    K+  K    S+      WN+A+EYD MWP   + +
Sbjct: 699 LKNVETDEEMFNCARTMRKLSQKHANYSIITYSPLWNIADEYDIMWPQTMQDI 751


>AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7a protein.
          Length = 833

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 503 LKSKSKDEDESNPSSP--KIQPKTITASLNVRDFDWNVANEYDPMWPNDYEKV 655
           LK+   DE+  N +    K+  K    S+      WN+A+EYD MWP   + +
Sbjct: 715 LKNVETDEEMFNCARTMRKLSQKHANYSIITYSPLWNIADEYDIMWPQTMQDI 767


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -1

Query: 187 LKVMICFLHNIIF--TSFLYFYLKPQL-VSSVAHDFGFFKILNYLIIFMYYLFHL 32
           L +++C + ++++   ++L+ Y+     VS V+H F FF I  +L      LFHL
Sbjct: 81  LFIVVCVVSHMLYHTNTYLFQYISKYCSVSIVSHYFHFFLISCFLANLRLALFHL 135


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +2

Query: 473  STQVLTPVIDLKSKSKDEDESNPSSPKIQPKTITASLNVRDFDWN 607
            +T V   VID   +  D+DE    SP++  +T T ++  R++D N
Sbjct: 3434 TTTVTKEVIDDSQEMGDDDEPKQESPQV-VETTTTTMTSREYDDN 3477


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +2

Query: 473  STQVLTPVIDLKSKSKDEDESNPSSPKIQPKTITASLNVRDFDWN 607
            +T V   VID   +  D+DE    SP++  +T T ++  R++D N
Sbjct: 3434 TTTVTKEVIDDSQEMGDDDEPKQESPQV-VETTTTTMTSREYDDN 3477


>Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical
           protein F36D3.6 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 408 YSHSYN*KKQQLHNLNEKPCVVP 476
           YS S+N ++Q+L+ L E PC+ P
Sbjct: 156 YSDSFNYEEQRLYILKEYPCIPP 178


>AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical
           protein T15B7.14 protein.
          Length = 650

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = -1

Query: 196 LCWLKVMICFLHNIIFTSFLYFYLKPQLVSSVAHDFGFFKILNYLIIFMYYLF 38
           L ++ V +C+L+ +I+T   + + + Q    +A   GF+  L  +++  Y+LF
Sbjct: 93  LFYIAVAVCYLYWLIYTFCTFKFSRSQFDLLIAPYRGFY--LKSVLMLFYFLF 143


>Z81127-1|CAB03386.1|  325|Caenorhabditis elegans Hypothetical
           protein T22G5.1 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 563 KTITASLNVRDFDWNVANEYDPMWPNDYEKV 655
           KT  A+ N+    W   N+Y+ +W  DY KV
Sbjct: 283 KTDAAANNIYLAGWTSNNQYEQVWLRDYLKV 313


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 486 STCVERRKASRLGCVTAAFFSCNCDCSNLIPEDHAATFSV 367
           ++CV++   S   C TA   SC   C  ++ E    TF +
Sbjct: 750 TSCVQQNSQSVPQCSTACTDSCRSSCVEIVKESAEPTFKL 789


>AF025467-9|AAB71041.2|  228|Caenorhabditis elegans Hypothetical
           protein R148.7 protein.
          Length = 228

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +2

Query: 452 KREALRRSTQVLT-PVIDLKSKSKDEDESNPSSPKIQPKTITASLNVRDFDWNVANEYDP 628
           + +A RR+T+       +  S+ +DEDE++   P ++P    + + V    +  +NE  P
Sbjct: 46  RAKAKRRATKAAELNSAEANSEIRDEDETDCEMPSVKPNQSPSKIPVLQKGYQFSNEEKP 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,474,429
Number of Sequences: 27780
Number of extensions: 303187
Number of successful extensions: 1068
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)