Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_F23
(748 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.7
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 5.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.3
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.7
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +2
Query: 509 SKSKDEDESNPSSPKIQPKTITASLN------VRDFDWNVANEYDPMWPNDYEKVAK 661
SK + +D + + K +PK I++ N +++ N N Y+ + N+Y+K+ K
Sbjct: 63 SKERSQDRTERETSK-EPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYK 118
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.7
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +2
Query: 509 SKSKDEDESNPSSPKIQPKTITASLN------VRDFDWNVANEYDPMWPNDYEKVAK 661
SK + +D + + K +PK I++ N +++ N N Y+ + N+Y+K+ K
Sbjct: 63 SKERSQDRTERETSK-EPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYK 118
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 223 WLLGFGACMEHIIDFNSLMLMITHFVKRSNPVI 321
WL+ +G + +SL+ + H +R NP I
Sbjct: 285 WLVNWGEQWGFLPSKDSLVFVDNHDTQRDNPQI 317
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 716 SYPTCLLCHLTEASLLAILLQLFHN 642
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 716 SYPTCLLCHLTEASLLAILLQLFHN 642
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 716 SYPTCLLCHLTEASLLAILLQLFHN 642
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 716 SYPTCLLCHLTEASLLAILLQLFHN 642
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 716 SYPTCLLCHLTEASLLAILLQLFHN 642
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 716 SYPTCLLCHLTEASLLAILLQLFHN 642
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 494 VIDLKSKSKDEDESNPSSPKIQPKTITASLN 586
++DL++ S D ESN P T+ S N
Sbjct: 363 ILDLRNNSIDRIESNAFLPLYNLHTLELSDN 393
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,251
Number of Sequences: 438
Number of extensions: 3607
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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