Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_F19
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 179 2e-45
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 132 4e-31
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 130 1e-30
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 118 4e-27
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 106 2e-23
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 29 2.9
02_05_0186 + 26569594-26570271 29 2.9
02_05_1270 + 35360375-35360494,35361361-35361519,35361611-353617... 29 5.1
03_05_1004 + 29621209-29621590,29622615-29622827,29622974-296233... 28 9.0
03_02_0536 - 9284079-9286034 28 9.0
01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951 28 9.0
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 179 bits (436), Expect = 2e-45
Identities = 96/223 (43%), Positives = 140/223 (62%), Gaps = 1/223 (0%)
Frame = +1
Query: 76 IAQVTAQAGQNVTIVDLEPEILNKAQKSIQANLGRVAKKLYKDDPGKI-EGFVKESLDRI 252
IAQ+ A AG V ++D + L++A SI ++L R+ K G++ + + S+++I
Sbjct: 25 IAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLVAK------GQLSQASCEHSIEQI 78
Query: 253 KISTKVEDSVNADLIIEAIVEKLDIKQDLFNKLDKLAPEHTILATNTSSISVNAIGSGIK 432
K + V++ +ADL+IEAIVE DIK+ LF +LDK+ ILA+NTSSIS+ + S
Sbjct: 79 KCVSSVQELRDADLVIEAIVESEDIKKKLFVELDKITKPSAILASNTSSISITRLASATN 138
Query: 433 RKDKFGGLHFFNPVPVMRLLEVIKSDHISEDTYQAMMEWGKSVGKTCITCKDTPGFVVNR 612
R + G+HFFNP P+M+L+E+I+ SE+ + + + + +GKT I +D PGF+VNR
Sbjct: 139 RPCQVIGMHFFNPPPIMKLIEIIRGADTSEEVFTKVKSFSERLGKTVICSQDYPGFIVNR 198
Query: 613 ILXPYSAEALRMYERGDATKEDIDIGLKLGAGFPMGPFXLADY 741
IL P EA G ATKEDID G+KLG PMGP LAD+
Sbjct: 199 ILMPMINEAFWALYTGVATKEDIDTGMKLGTNHPMGPLQLADF 241
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 132 bits (318), Expect = 4e-31
Identities = 76/224 (33%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Frame = +1
Query: 76 IAQVTAQAGQNVTIVDLEPEILNKAQKSIQANLGRVAKK--LYKDDPGKIEGFVKESLDR 249
IA + +V + ++ P+ L + QK I ANL + K+ L KD K +K +LD
Sbjct: 324 IATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALD- 382
Query: 250 IKISTKVEDSVNADLIIEAIVEKLDIKQDLFNKLDKLAPEHTILATNTSSISVNAIGSGI 429
D + D++IEA++EK+ +KQ +F+ L+K+ P H ILATNTS+I +N +G
Sbjct: 383 ------YSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKT 436
Query: 430 KRKDKFGGLHFFNPVPVMRLLEVIKSDHISEDTYQAMMEWGKSVGKTCITCKDTPGFVVN 609
+D+ G HFF+P +M LLE+++++ S ++ GK + K + + GF VN
Sbjct: 437 NSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVN 496
Query: 610 RILXPYSAEALRMYERG-DATKEDIDIGLKLGAGFPMGPFXLAD 738
R PY+ + + G D + D I G PMGPF L D
Sbjct: 497 RTFFPYTQGSHLLVSIGIDVFRIDRVIS---SFGMPMGPFQLQD 537
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 130 bits (314), Expect = 1e-30
Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 3/224 (1%)
Frame = +1
Query: 76 IAQVTAQAGQNVTIVDLEPEILNKAQKSIQANL-GRVAK-KLYKDDPGKIEGFVKESLDR 249
IA + V + ++ + LN I+ANL RV K K+ ++ K V LD
Sbjct: 329 IATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAMSLVTGVLD- 387
Query: 250 IKISTKVEDSVNADLIIEAIVEKLDIKQDLFNKLDKLAPEHTILATNTSSISVNAIGSGI 429
E + DL+IEA++E + +KQ +F+ L+K P H +LATNTS+I +N IG
Sbjct: 388 ------YERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCVLATNTSTIDLNLIGEKT 441
Query: 430 KRKDKFGGLHFFNPVPVMRLLEVIKSDHISEDTYQAMMEWGKSVGKTCITCKDTPGFVVN 609
+ KD+ G HFF+P VM LLE++++ H S +++ GK + KT I + GF VN
Sbjct: 442 RSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVN 501
Query: 610 RILXPYSAEALRMYERG-DATKEDIDIGLKLGAGFPMGPFXLAD 738
R+ PY+ AL + G D K D G PMGPF LAD
Sbjct: 502 RMFFPYTQSALLFVDLGMDVYKID---RACTKFGMPMGPFRLAD 542
>05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 118 bits (285), Expect = 4e-27
Identities = 75/236 (31%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Frame = +1
Query: 76 IAQVTAQAGQNVTIVDLEPEILNKAQKSIQANL------GRVAKKLYKDDPGKIEGFVK- 234
IA + V + ++ + L+ I+ANL G++ K++Y+ + G V
Sbjct: 325 IATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDY 384
Query: 235 ---ESLDRIKISTKVEDSVNADLIIE----AIVEKLDIKQDLFNKLDKLAPEHTILATNT 393
+ +D + + + A IE A+VE + +KQ +F L++ P H +LATNT
Sbjct: 385 ERFKDVDLVIEESNTSNCYLAIYFIEQYWMAVVENVKVKQQVFADLERYCPSHCVLATNT 444
Query: 394 SSISVNAIGSGIKRKDKFGGLHFFNPVPVMRLLEVIKSDHISEDTYQAMMEWGKSVGKTC 573
S+I ++ IG +D+ G HFF+P VM LLE+++S+H S +++ GK + KT
Sbjct: 445 STIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTP 504
Query: 574 ITCKDTPGFVVNRILXPYSAEALRMYERG-DATKEDIDIGLKLGAGFPMGPFXLAD 738
+ + GF VNR+ PY++ AL + +RG D K D + G PMGPF L D
Sbjct: 505 VVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKID---QVCTEFGMPMGPFRLLD 557
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 106 bits (254), Expect = 2e-23
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Frame = +1
Query: 88 TAQAGQNVTIV--DLEPEILNKAQKSIQANLGRVAKK--LYKDDPGKIEGFVKESLDRIK 255
TA N+ ++ ++ + L+ ++ANL + K+ + K+D + LD
Sbjct: 328 TALISNNLLVILKEVNEQFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLD--- 384
Query: 256 ISTKVEDSVNADLIIEAIVEKLDIKQDLFNKLDKLAPEHTILATNTSSISVNAIGSGIKR 435
E AD++IEA++E L +KQ +F L+K + ILATNTS+I ++ IG
Sbjct: 385 ----YEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSC 440
Query: 436 KDKFGGLHFFNPVPVMRLLEVIKSDHISEDTYQAMMEWGKSVGKTCITCKDTPGFVVNRI 615
+D+ G HFF+P M LLE+I++ S ++ K + KT I + GF VNR+
Sbjct: 441 QDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIRKTPIVVGNCTGFAVNRM 500
Query: 616 LXPYSAEALRMYERGDATKEDIDIGLKLGAGFPMGPFXLAD 738
P++ A + + G + K G PMGPF LAD
Sbjct: 501 FFPFTQVAYFLVDYGLDVYHIDHVITKF--GMPMGPFRLAD 539
>07_03_1723 - 29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = -2
Query: 323 SSFSTMA-SIIKSAFTLSSTFVDILILSRDSLTKPSI-LPGSSLYSFLATLP 174
SS STM S K++ LS T IL S++S+TKPS LP ++ S L ++P
Sbjct: 1301 SSSSTMQESAAKTSDVLSPTGPSILP-SKESMTKPSSPLPDGTISSSLLSIP 1351
>02_05_0186 + 26569594-26570271
Length = 225
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +3
Query: 453 PPFLQSSTSDATPGGYKKRSHFRGHLPGHDGV 548
PP SS+SD GG KKR GH P + GV
Sbjct: 23 PPSTASSSSDGA-GGKKKRPRKDGHHPTYRGV 53
>02_05_1270 +
35360375-35360494,35361361-35361519,35361611-35361722,
35362306-35362422,35362570-35362721,35362804-35362986,
35363627-35363661,35363809-35363965,35364052-35364105,
35364196-35364288,35364373-35364515,35364753-35364823,
35365234-35365317,35365408-35365532,35366918-35366938
Length = 541
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -3
Query: 172 SWLGYFSGLY*VFPALNLLWSHSGQPALL 86
S + Y SGL + ALNL+ H GQPALL
Sbjct: 459 SMVAYGSGLMITYVALNLMDGH-GQPALL 486
>03_05_1004 +
29621209-29621590,29622615-29622827,29622974-29623337,
29623751-29624573
Length = 593
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 716 IGNPAPNFRPISMSSLVASPLSYILNASALYGXRILLTTNPGVSLQVMQVLPTDLPHSIM 537
+ N P+F +S SL++SP S + N + L + L VSLQ P +
Sbjct: 364 VSNSRPDFGLVSPDSLMSSPHSSLENVNLLTS-QSLNEQQSSVSLQHFVDWPRTPAQGAL 422
Query: 536 AW*VSSEM 513
AW + +M
Sbjct: 423 AWPDAEDM 430
>03_02_0536 - 9284079-9286034
Length = 651
Score = 27.9 bits (59), Expect = 9.0
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 10/72 (13%)
Frame = +3
Query: 12 STSQSCAKNSYSXRWG---PYGHRXRS-------GNSAGWPECDHSRFRAGNTQ*SPEKY 161
+ S S S RWG PYG R S GN G+ D R R GN +K
Sbjct: 164 NASSSANGPSPRDRWGSPDPYGRRSPSYSSPPGNGNGYGYGGYDDYRERNGNNNTDDKKP 223
Query: 162 PSQLRQGSQETV 197
P+ +R E V
Sbjct: 224 PTPVRDMKPERV 235
>01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951
Length = 563
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 91 AQAGQNVTIVDLEPEILNKAQKSIQANLGRVAKKLYKDDPGKIEGFVK--ESLDRIKIST 264
AQA Q L+P L K R+ K LY D P I+ F++ + D K++
Sbjct: 250 AQAVQTTVDWTLDPSKLLVGHKFASGAYSRLYKGLYDDKPVAIK-FIRQPDDDDNGKMAA 308
Query: 265 KVEDSVNADL 294
K+E N+++
Sbjct: 309 KLEKQYNSEV 318
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,378,657
Number of Sequences: 37544
Number of extensions: 454621
Number of successful extensions: 1211
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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