Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_F15
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 360 e-100
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.005
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 32 0.58
U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical... 29 4.1
AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical... 29 4.1
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 7.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 7.2
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 7.2
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 28 7.2
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 9.5
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 9.5
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 360 bits (885), Expect = e-100
Identities = 168/254 (66%), Positives = 200/254 (78%)
Frame = +3
Query: 75 RGPXQHLKRLNAPKAWMLDKLGGVYAPXPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 254
RGP +HLKRL AP WMLDKLGGV+A P+ GPHKLRE LPL +FLRNRLKYAL E
Sbjct: 2 RGPKKHLKRLAAPSHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 255 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 434
KI+ QR+++VDGKVRT +P GFMDVV+IE+TNE FR++YD KGR+ +HRI EA +K
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFK 121
Query: 435 LCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCM 614
LCKVK V T K VP L T DGRTIRYPDP +KVND+I +I+T KI D +KFE GNL
Sbjct: 122 LCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAY 181
Query: 615 ITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGK 794
+TGGRN+GRVG I RER PG+ DI+HIKDS GH+FATR++NVF+IGKG KA +SLP G
Sbjct: 182 VTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGA 241
Query: 795 GIRLTIAEERDXRI 836
GIRL+IAEERD R+
Sbjct: 242 GIRLSIAEERDKRM 255
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/63 (34%), Positives = 25/63 (39%)
Frame = +2
Query: 647 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGVHLAAARQGHPPHHRRGAG 826
HHR E AH G HGTH H E H+ H G H + H P H G
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAHHGHHG 459
Query: 827 QXH 835
+ H
Sbjct: 460 EHH 462
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 647 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGV-HLAAARQGHPPHH 811
HH E H H G HGTH H GH G H A A GH HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580
Score = 35.5 bits (78), Expect = 0.047
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +2
Query: 638 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGV-HLAAARQGHPPHH 811
A HH E H H G HGTH H GH G H A A GH H
Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEH 522
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 686 HCAHQGLHGTHLRHEVEQR-VHNRQGHXGVHLAAARQGHPPHHRRGAGQXH 835
H AH HG H RH E H+ H G H H HH A H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/113 (24%), Positives = 35/113 (30%), Gaps = 2/113 (1%)
Frame = +2
Query: 503 HHPLPRPTYQSQRFH-PVRHCNYEDYGLHQV*VWELVYDHGRP*LGACG-HHRVPRETSR 676
HH + + H P H ++ ++G H H G G HH P
Sbjct: 462 HHAPAHHGHHGEHHHAPAHHGHHGEHGTHH---GHHGSHHSPAHHGHHGEHHHAPAHHGH 518
Query: 677 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGVHLAAARQGHPPHHRRGAGQXH 835
H H HG H H H G G H H P H G+ H
Sbjct: 519 ---HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHH 568
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/73 (34%), Positives = 27/73 (36%)
Frame = +2
Query: 617 HGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGVHLAAARQG 796
HG G+ G H T L H H G HGTH H+ H G H A
Sbjct: 643 HGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTH------HGAHHSPAHHGHH--GAHHE 694
Query: 797 HPPHHRRGAGQXH 835
H HH GA H
Sbjct: 695 HGAHH--GAHHGH 705
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +2
Query: 647 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGVHLAAARQGHPPHHRRGAG 826
HH P H G HG H H GH G H H P H G
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHG 690
Query: 827 QXH 835
H
Sbjct: 691 AHH 693
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +2
Query: 647 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGVHLA-AARQG-HPPHHRRG 820
HH E H H G HG+H H H H H G H HH G
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAG 619
Query: 821 AGQXH 835
G H
Sbjct: 620 YGAHH 624
Score = 31.1 bits (67), Expect = 1.0
Identities = 30/117 (25%), Positives = 37/117 (31%), Gaps = 6/117 (5%)
Frame = +2
Query: 503 HHPLPRPTYQSQRFH-PVRHCNYEDYGLHQV*VWELV-YDHGRP*LGACGHH--RVPRET 670
HH + + H P H ++ +G H V + HG GHH
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHG 614
Query: 671 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQG--HXGVHLAAARQGHPPHHRRGAGQXH 835
+ AH G HG H H H G H G H GH H A H
Sbjct: 615 HHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +2
Query: 644 GHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGVH 775
G H P H H HG H H ++ H+ GH H
Sbjct: 678 GAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKH 721
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +2
Query: 647 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHXGVHLAAARQG-HPPHHRRGA 823
HH P H HG H H GH G H + A G H HH A
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEH------GTHHGHHGSHHSPAHHGHHGEHHHAPA 514
Query: 824 GQXH 835
H
Sbjct: 515 HHGH 518
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 686 HCAHQGLHGTHLRHEVEQRVHNRQGHXGVHLAAARQGH--PPHHRRGAGQ 829
HC G HG H R H G G R GH PPHH G+
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 686 HC-AHQGLHGTHLRHEVEQRVHNRQGHXGVHLAAARQGHPPHH 811
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
>U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical
protein C48B6.4 protein.
Length = 623
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = +3
Query: 387 GRFTIHRITPEEAKYKLCKVKRVATGPKNVP-----YLVTHDGRTIR-YP 518
G+ + R+T E Y+ CK+++ A K VP Y+V H R I+ YP
Sbjct: 302 GQIIVRRLTDPEYPYRHCKIQKFAVRCKLVPENYGWYVVWHCQRDIQEYP 351
>AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical
protein Y48B6A.13b protein.
Length = 377
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 605 LVYDHGRP*LGACGHHRVPRETSRLLRH 688
LV+D GR +G+ R RETS+LL+H
Sbjct: 207 LVFDDGRKKVGSSEGMRRSRETSQLLKH 234
>AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical
protein Y48B6A.13a protein.
Length = 326
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 605 LVYDHGRP*LGACGHHRVPRETSRLLRH 688
LV+D GR +G+ R RETS+LL+H
Sbjct: 156 LVFDDGRKKVGSSEGMRRSRETSQLLKH 183
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 834 CXCPAPRRW*GGCPCRAAARCTPXCPCRL*TRCSTSWRRC 715
C C PR C CR C C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 834 CXCPAPRRW*GGCPCRAAARCTPXCPCRL*TRCSTSWRRC 715
C C PR C CR C C C TRC T R C
Sbjct: 84 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 834 CXCPAPRRW*GGCPCRAAARCTPXCPCRL*TRCSTSWRRC 715
C C PR C CR C C C TRC T R C
Sbjct: 85 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 834 CXCPAPRRW*GGCPCRAAARCTPXCPCRL*TRCSTSWRRC 715
C C PR C CR C C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 544 ESLTLISGSG*RMVRPSCVTKYGTFLGPVATRLTLHNLYLASSGVIRWIVNLPLT 380
E ++ + G V P C Y PVA + H Y A + ++R N P T
Sbjct: 868 EQASMYNAEG-EFVNPFCRLSYAPKQPPVAANIANHKAYFAQAVLVRGPGNCPET 921
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 798 CPCRAAARCTPXCP-CRL*TRCS-TSWRRCVP 709
C C+ A C P CP + + CS T R C+P
Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 793 LPRGSEMYAXVPLPIMNTLFNLVAKVCPVESLMCTMSKE 677
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 793 LPRGSEMYAXVPLPIMNTLFNLVAKVCPVESLMCTMSKE 677
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,393,714
Number of Sequences: 27780
Number of extensions: 468939
Number of successful extensions: 1401
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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