Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_F06
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_02_0048 - 10626467-10627498,10628522-10628617                       30   1.8  
09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094     29   3.2  
10_07_0097 - 12837998-12838336,12839201-12839317,12839737-128398...    28   9.8  
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893...    28   9.8  
02_02_0252 + 8323087-8323523,8323929-8324019,8324155-8324281,832...    28   9.8  

>01_02_0048 - 10626467-10627498,10628522-10628617
          Length = 375

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 570 ICSTSLLRQSSCAYCTRCIL*MGPEP 493
           +CS+ LL +    YC  C L +GPEP
Sbjct: 75  LCSSCLLLEYRSFYCCCCFLLLGPEP 100


>09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094
          Length = 326

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 601 CDVGSHSSYWHL*YVFASAKFLRILHSLHSLNGS 500
           CD G H  Y     +F S++ +  LH  HS NGS
Sbjct: 65  CDGGGHEHYIIAALMFDSSRKMYDLHRFHSKNGS 98


>10_07_0097 -
           12837998-12838336,12839201-12839317,12839737-12839868,
           12840656-12840907
          Length = 279

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 694 FEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVA 795
           F + + PRD++D  K  ++NG+  +  T  R  A
Sbjct: 207 FREMELPRDMVDIEKELQKNGIKPMTNTAKRRAA 240


>08_01_0906 +
           8933230-8933797,8933894-8934543,8937956-8938615,
           8939751-8939817,8940421-8940724,8942993-8942996,
           8944539-8946449
          Length = 1387

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = -3

Query: 665 HITDSMRHVIAVRLGGVMRGYV*CRESLVVLASVVR--LCFGKVLAHIALAAFFKWVLNL 492
           H  D  RH++  + GG+ +      ESL ++  +        K+ A  +L   F W+L+ 
Sbjct: 777 HRNDETRHILLQKCGGLPKVICAVAESLSMVGDIKEEDNLVSKLAATRSLDDVFSWLLSY 836

Query: 491 L-LLPDTLK 468
               PD+LK
Sbjct: 837 FRSCPDSLK 845


>02_02_0252 +
           8323087-8323523,8323929-8324019,8324155-8324281,
           8324469-8324623
          Length = 269

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 512 RMQRVQYAQELCRSKDVLQMPVRRVTPDITRIRASRLL 625
           R++++QY  EL RS   LQM V  ++P +  +   R L
Sbjct: 158 RVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSL 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,243,602
Number of Sequences: 37544
Number of extensions: 464835
Number of successful extensions: 1120
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)