BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_F06
(796 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M59076-1|AAA28679.1| 1302|Drosophila melanogaster P glycoprotein... 29 7.3
AY058791-1|AAL14020.1| 1302|Drosophila melanogaster SD10012p pro... 29 7.3
AE013599-1620|AAF58437.2| 1302|Drosophila melanogaster CG3879-PA... 29 7.3
AY748349-1|AAU89434.1| 1386|Drosophila melanogaster uncoordinate... 29 9.7
AY118608-1|AAM49977.1| 1228|Drosophila melanogaster LP08350p pro... 29 9.7
AE014298-3088|AAF50849.3| 1386|Drosophila melanogaster CG1501-PA... 29 9.7
>M59076-1|AAA28679.1| 1302|Drosophila melanogaster P glycoprotein
protein.
Length = 1302
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 728 SMMSRGGSDCSNVAATHGGAGHITDSMRHVIAVRLGGVMRGYV*C-RESLVVLASVVRLC 552
++ SR SDCSNV G G +M +A + G++ G+V +++L+ L ++ +C
Sbjct: 836 ALCSRLASDCSNV---QGATGARVGTMLQAVATLVVGMVVGFVFSWQQTLLTLVTLPLVC 892
Query: 551 FGKVL 537
L
Sbjct: 893 LSVYL 897
>AY058791-1|AAL14020.1| 1302|Drosophila melanogaster SD10012p protein.
Length = 1302
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 728 SMMSRGGSDCSNVAATHGGAGHITDSMRHVIAVRLGGVMRGYV*C-RESLVVLASVVRLC 552
++ SR SDCSNV G G +M +A + G++ G+V +++L+ L ++ +C
Sbjct: 836 ALCSRLASDCSNV---QGATGARVGTMLQAVATLVVGMVVGFVFSWQQTLLTLVTLPLVC 892
Query: 551 FGKVL 537
L
Sbjct: 893 LSVYL 897
>AE013599-1620|AAF58437.2| 1302|Drosophila melanogaster CG3879-PA
protein.
Length = 1302
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 728 SMMSRGGSDCSNVAATHGGAGHITDSMRHVIAVRLGGVMRGYV*C-RESLVVLASVVRLC 552
++ SR SDCSNV G G +M +A + G++ G+V +++L+ L ++ +C
Sbjct: 836 ALCSRLASDCSNV---QGATGARVGTMLQAVATLVVGMVVGFVFSWQQTLLTLVTLPLVC 892
Query: 551 FGKVL 537
L
Sbjct: 893 LSVYL 897
>AY748349-1|AAU89434.1| 1386|Drosophila melanogaster uncoordinated
protein.
Length = 1386
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GRPMSAVRSASARGTCAHNVL 64
GRP+SA +AS G CAH VL
Sbjct: 1287 GRPVSAPTAASEPGLCAHLVL 1307
>AY118608-1|AAM49977.1| 1228|Drosophila melanogaster LP08350p protein.
Length = 1228
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GRPMSAVRSASARGTCAHNVL 64
GRP+SA +AS G CAH VL
Sbjct: 1129 GRPVSAPTAASEPGLCAHLVL 1149
>AE014298-3088|AAF50849.3| 1386|Drosophila melanogaster CG1501-PA
protein.
Length = 1386
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GRPMSAVRSASARGTCAHNVL 64
GRP+SA +AS G CAH VL
Sbjct: 1287 GRPVSAPTAASEPGLCAHLVL 1307
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,500,110
Number of Sequences: 53049
Number of extensions: 813351
Number of successful extensions: 1859
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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