Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_F06
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical pr... 36 0.044
Z74038-7|CAE17835.1| 132|Caenorhabditis elegans Hypothetical pr... 29 2.9
U29244-12|AAC71093.3| 604|Caenorhabditis elegans Hypothetical p... 29 2.9
AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm rece... 29 5.1
Z81533-5|CAB04337.1| 342|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical pr... 28 8.9
>Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical
protein F36G9.7 protein.
Length = 280
Score = 35.5 bits (78), Expect = 0.044
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = -1
Query: 433 HIHSSIFKNFIFNTTKHIITMKLYYTIVTFVRKSIFTIMNKCAEHFIRFPLYSHIMLWLS 254
H+ SSIF N I N + ++ + F ++I+ ++NK +HF FP Y ++
Sbjct: 201 HLFSSIF-NLIVNFCQ-------LFSPIPFSNEAIYYVLNKPFQHFSSFPYYEYLCTHYW 252
Query: 253 SHMFCLTQFMFF 218
+++ C T F
Sbjct: 253 TNLTCYTSIFVF 264
>Z74038-7|CAE17835.1| 132|Caenorhabditis elegans Hypothetical
protein F58B4.6 protein.
Length = 132
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 496 TCCCYQTHLRSHPPFLHP*GSHIHSSIFKNFIFN 395
TCCCY S P L P GS I + + FIF+
Sbjct: 100 TCCCYGDGCNSSPSML-PLGSSILAVMISMFIFS 132
>U29244-12|AAC71093.3| 604|Caenorhabditis elegans Hypothetical
protein ZK1248.13 protein.
Length = 604
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 406 FIFNTTKHIITMKLYYTIVTFVRKSIFTIMNKC 308
F + +TK T KL + + +F+R + +MN+C
Sbjct: 378 FSWISTKSEFTCKLEHMLASFIRPEVIDVMNQC 410
>AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm
receptor protein 253 protein.
Length = 354
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/89 (23%), Positives = 44/89 (49%)
Frame = -1
Query: 433 HIHSSIFKNFIFNTTKHIITMKLYYTIVTFVRKSIFTIMNKCAEHFIRFPLYSHIMLWLS 254
+IHS +FK IF T ++ M + T VT++ S F + ++ + + + +L
Sbjct: 253 NIHSQLFKTLIFQTMIPVLLMHIPAT-VTYI-TSFFNVSSEIFGEILDLSIALYPVLNPL 310
Query: 253 SHMFCLTQFMFFKQNYLCVTCEEQKTVPI 167
+F +T +++ + + C +K VP+
Sbjct: 311 PTIFIVTS---YRKAVIDLLCCRKKIVPL 336
>Z81533-5|CAB04337.1| 342|Caenorhabditis elegans Hypothetical
protein F36G9.8 protein.
Length = 342
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -1
Query: 451 LHP*GSHIHSSIFKNFIFNTTKHIITMKLYYTIVTFVRKSIFTIMNKCAEHFIRFPLYSH 272
L P IH + ++ + I+ Y I++ V IFTI N +FI
Sbjct: 232 LSPTTRRIHLQLIRSLCYQIAVPILAF--YIPIISLVVPLIFTIPNSQTSYFIS------ 283
Query: 271 IMLWLSSHMFCLT-QFMFFKQNY 206
+L +S+H F T ++F ++Y
Sbjct: 284 -LLCMSTHTFLGTLSMLYFNRHY 305
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 436 NLKGVEMEGAILSVSGNNSRFRTH 507
NLKG E GA+L +SG N + T+
Sbjct: 660 NLKGNENSGAVLKISGENVKIVTN 683
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 293 DKVFRTLIHNSKYRFPYKCNDGVIEF---HCDDMFCGIK--DEVLKYTRVNVRTL 442
DK+ TL Y + +D V+EF + ++ G K DE+LKY R +VR L
Sbjct: 801 DKILPTLPPREYYAPKFMNSDTVLEFEKWYTENYNNGFKLHDELLKYCRSDVRIL 855
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 98 KNMQVYFR*RCVKLIYGNNVLVENRY 175
KN +V+FR R + N+++++NRY
Sbjct: 2577 KNFRVFFRTRASETTLHNSIVIDNRY 2602
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 98 KNMQVYFR*RCVKLIYGNNVLVENRY 175
KN +V+FR R + N+++++NRY
Sbjct: 2577 KNFRVFFRTRASETTLHNSIVIDNRY 2602
>Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical
protein K02E11.1 protein.
Length = 729
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = -1
Query: 382 IITMKLYYTIVTFVRKSIFTIMNKCAEHFIRFPLYSHIMLWLSSHMFCLTQFMFFKQNY 206
++ K + +VTF+ ++F + ++IRFP + + + +++ + + F F NY
Sbjct: 589 VVPEKYFMDVVTFLNFNLFAFLGSLMANWIRFPGPNTVWICVAARFWFM--FYFPAANY 645
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,238,682
Number of Sequences: 27780
Number of extensions: 421952
Number of successful extensions: 1059
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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