Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_F02
(444 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 104 7e-22
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 103 2e-21
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 102 4e-21
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 92 4e-18
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 58 6e-08
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 58 1e-07
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 8e-07
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 50 2e-05
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 43 0.003
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 37 0.17
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.30
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 34 1.2
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 34 1.6
UniRef50_Q09347 Cluster: Uncharacterized protein T05H10.3 precur... 33 2.8
UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n... 32 4.8
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 4.8
UniRef50_Q8TQT5 Cluster: Cell surface lipoprotein; n=3; Methanos... 32 4.8
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 32 6.4
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 104 bits (250), Expect = 7e-22
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +1
Query: 82 GRTAKNVNATKYTRYHSTKSPRKGTLPRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVL 261
G+ K+ N K T+Y K ++ + RRRYDRKQ G+GGQ+KPIF IVL
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVL 69
Query: 262 RLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 369
R+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 70 RMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
Score = 31.9 bits (69), Expect = 6.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 57 MVNVPKQRRTY-XXXXXXXXXXXXSQYKKSKERHAAQG 167
MVNVPK RRT+ +QYKK KE AQG
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQG 38
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 103 bits (247), Expect = 2e-21
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +1
Query: 112 KYTRYHSTKSPRKGTLPRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 285
K T+Y K + + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 286 VRSQVALKRCKHFELGGDKKRKGQMIQF 369
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 57 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 167
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 102 bits (244), Expect = 4e-21
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +1
Query: 112 KYTRYHSTKSPRKGTLPRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 285
K T+Y K + + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 286 VRSQVALKRCKHFELGGDKKRKGQMIQF 369
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 57 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 167
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 92.3 bits (219), Expect = 4e-18
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +1
Query: 94 KNVNATKYTRYHST--KSPRKGTLPRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 267
K+ K+T + T K + + +RRYDRKQ GYGGQ+KP+F IVLRL
Sbjct: 59 KSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRL 118
Query: 268 ECADCKVRSQVALKRCKHFELGGDKKRKG 354
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 119 QCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 58.4 bits (135), Expect = 6e-08
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 142 PRKGTL-PRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 318
P K +L + +RRYDRKQQGYGGQ+KP+F ++L C CK +LKR K
Sbjct: 28 PGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTK 87
Query: 319 HFEL 330
F++
Sbjct: 88 RFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +1
Query: 169 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 348
RRRYDRKQ+G+GG+ KPI I LR C CK + L R + FE +KK+
Sbjct: 38 RRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKK 97
Query: 349 K 351
K
Sbjct: 98 K 98
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 8e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 253 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 354
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 50.4 bits (115), Expect = 2e-05
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 163 RARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 315
+ +RRYDRKQQG+GGQ+KP+F + ++EC CK+ + C
Sbjct: 20 QGKRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRESTC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 42.7 bits (96), Expect = 0.003
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +2
Query: 161 PGLEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSVLIAR*DHRLH*RDASTLSLVVT 340
P D ++ VTVV P+ SS RR +P R+L SV S L AR DAST S VVT
Sbjct: 42 PKESDDTTESNPVTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVT 101
Query: 341 R 343
R
Sbjct: 102 R 102
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 37.1 bits (82), Expect = 0.17
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +1
Query: 127 HSTKSPRK---GTLPRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQ 297
HS + RK L +RR+ R GYGG +P F I LRL C +C
Sbjct: 20 HSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHKAIT 79
Query: 298 VALKRCKHFEL 330
R K FE+
Sbjct: 80 PPGIRAKKFEI 90
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 0.30
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 301 ALKRCKHFELGGDKKRKG 354
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 34.3 bits (75), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 136 KSPRKGTLPRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 315
++ ++ + RRY RKQ+GYG Q +P VL + C C + R
Sbjct: 26 RAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVCGRKRPFLGIRL 85
Query: 316 KHFEL 330
K EL
Sbjct: 86 KRLEL 90
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 33.9 bits (74), Expect = 1.6
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 172 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFE 327
RR+ ++GYGGQ P + L C DCK + R K FE
Sbjct: 38 RRHAEDKKGYGGQKFPKLAKPAKVTKKVTRLLTCPDCKKKFNTYGLRVKKFE 89
>UniRef50_Q09347 Cluster: Uncharacterized protein T05H10.3
precursor; n=2; Caenorhabditis|Rep: Uncharacterized
protein T05H10.3 precursor - Caenorhabditis elegans
Length = 158
Score = 33.1 bits (72), Expect = 2.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 133 YCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHDINKRQKEH 11
YCD +C H F+ Y+ + G F F+ + + KR EH
Sbjct: 74 YCDIVCPKSHTVFISYIDQ--GHRACFNFITYQVEKRNDEH 112
>UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.3 bits (70), Expect = 4.8
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -3
Query: 151 LSLDFLYCDTLCTLWHLHFLQYVLRCFGTF 62
L+L LYC TLC LH LQ V FGT+
Sbjct: 5 LALPVLYCVTLCAECFLHPLQNVFLDFGTY 34
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 4.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 138 FCTVIPCVLCGIYIFCSTSC 79
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_Q8TQT5 Cluster: Cell surface lipoprotein; n=3;
Methanosarcina|Rep: Cell surface lipoprotein -
Methanosarcina acetivorans
Length = 231
Score = 32.3 bits (70), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 35 IVPNELKNGERTKTAQDV--LQKM*MPQSTQGITVQKVQGKARCPGLED 175
I P E + E T+T ++ L++ PQ T+ + + G+ PGLED
Sbjct: 73 ITPEETETPEETETPEETETLEEAETPQETETVKEDETPGETLTPGLED 121
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.9 bits (69), Expect = 6.4
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 365 WIICPFLFL---SPPSSKCLHLFNATCDLTLQSAHSRRS 258
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,364,289
Number of Sequences: 1657284
Number of extensions: 6667777
Number of successful extensions: 17527
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17517
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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