Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_F02
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-2|CAA90434.1| 105|Caenorhabditis elegans Hypothetical pr... 103 6e-23
AF304121-1|AAG50234.1| 105|Caenorhabditis elegans 60S ribosomal... 103 6e-23
Z47812-3|CAA87790.1| 158|Caenorhabditis elegans Hypothetical pr... 33 0.093
Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 27 6.1
AF026201-1|AAB71239.1| 113|Caenorhabditis elegans Hypothetical ... 27 6.1
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 27 6.1
Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 27 8.1
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 27 8.1
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z50109-2|CAA90434.1| 105|Caenorhabditis elegans Hypothetical
protein C09H10.2 protein.
Length = 105
Score = 103 bits (247), Expect = 6e-23
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +1
Query: 82 GRTAKNVNATKYTRYHSTKSPRKGTLPRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVL 261
G+ K+ N K T+Y K ++ + RRRYDRKQ G+GGQ+KPIF IVL
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVL 69
Query: 262 RLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 369
R+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 70 RMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 57 MVNVPKQRRTY-XXXXXXXXXXXXSQYKKSKERHAAQG 167
MVNVPK RRT+ +QYKK KE AQG
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQG 38
>AF304121-1|AAG50234.1| 105|Caenorhabditis elegans 60S ribosomal
protein L44 L41 protein.
Length = 105
Score = 103 bits (247), Expect = 6e-23
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +1
Query: 82 GRTAKNVNATKYTRYHSTKSPRKGTLPRARRRYDRKQQGYGGQSKPIFXXXXXXXXXIVL 261
G+ K+ N K T+Y K ++ + RRRYDRKQ G+GGQ+KPIF IVL
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVL 69
Query: 262 RLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 369
R+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 70 RMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 57 MVNVPKQRRTY-XXXXXXXXXXXXSQYKKSKERHAAQG 167
MVNVPK RRT+ +QYKK KE AQG
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQG 38
>Z47812-3|CAA87790.1| 158|Caenorhabditis elegans Hypothetical
protein T05H10.3 protein.
Length = 158
Score = 33.1 bits (72), Expect = 0.093
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 133 YCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHDINKRQKEH 11
YCD +C H F+ Y+ + G F F+ + + KR EH
Sbjct: 74 YCDIVCPKSHTVFISYIDQ--GHRACFNFITYQVEKRNDEH 112
>Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical
protein T22C1.9 protein.
Length = 195
Score = 28.3 bits (60), Expect = 2.7
Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 190 VYDHNVF*PWA-ACLSLDFLYCDTLCTLWHL 101
+YDH+ + W +S+ F++C C +W +
Sbjct: 27 IYDHHYYPMWFWIVISVGFVFCTLSCAVWFM 57
>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical
protein ZK897.1 protein.
Length = 1396
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 104 MPQSTQGITVQKVQGKARCPGLEDVMIVNS 193
+P +T+G TV K + K+R +ED+ + NS
Sbjct: 442 VPVTTRGATVGKRKDKSRSRSIEDLSLFNS 471
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 76 SAGRTAKNVNATKYTRYHSTKSPRKGTLPRARRRYDRKQQ 195
SAG T +V T S+ +P P+A RRY+ +++
Sbjct: 1409 SAGTTVSSVTTPASTALPSSATPSVTDSPKASRRYNARRK 1448
>AF026201-1|AAB71239.1| 113|Caenorhabditis elegans Hypothetical
protein D1079.1 protein.
Length = 113
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -1
Query: 159 QRAFPW-TFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNV 22
QR++P+ TF + +LC +YI C S +V + FL +F + +NV
Sbjct: 30 QRSYPFQTFLAFLDFMLCALYIHCFGLLSISVEYKIAFLYNF-VMDSNV 77
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 27.1 bits (57), Expect = 6.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 73 NSAGRTAKNVNATKYTRYHSTKSPRKGTLP---RARRRYDRKQQGYGGQSKPI 222
+S A+N + T H T+S K +L R RRR + +Q Y S PI
Sbjct: 648 SSVAGNARNASGANITTIHVTES--KSSLKKSHRRRRRVAKSRQSYTAGSSPI 698
>Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical
protein F26H11.4 protein.
Length = 739
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 82 GRTAKNVNATKYTRYHSTKSPRKGTLPRARRRYDRKQQGYGGQSK 216
G KN+++ R HS+K RKG L + + RK G +K
Sbjct: 207 GPAQKNLSSQ---RKHSSKRNRKGLLRNVAKLWGRKSDGIANPTK 248
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 145 LDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFE 50
++ + C+T L FL +V C+GT T +
Sbjct: 736 IELIQCETSVKLLDRRFLMHVSICYGTHTFLD 767
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 145 LDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFE 50
++ + C+T L FL +V C+GT T +
Sbjct: 736 IELIQCETSVKLLDRRFLMHVSICYGTHTFLD 767
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 259 LRLECADCKVRSQVALKRCKHFELGGDKK 345
+ +E A+CK R + + K+CK E ++K
Sbjct: 152 MAVELAECKKRDEESRKKCKQLEAELERK 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,988,301
Number of Sequences: 27780
Number of extensions: 170341
Number of successful extensions: 600
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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