Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_E18
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19D5.05c |||U3 snoRNP-associated protein Imp3 |Schizosacchar... 175 5e-45
SPAC24H6.07 |rps901|rps9-1, rps9a|40S ribosomal protein S9|Schiz... 50 3e-07
SPBC29A3.12 |rps902|rps9-2, rps9b|40S ribosomal protein S9|Schiz... 49 8e-07
SPCC1739.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 29 0.53
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 29 0.53
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 29 0.92
SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr... 28 1.6
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.1
SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB comp... 27 2.8
SPBC902.03 |||Spo7 homolog|Schizosaccharomyces pombe|chr 2|||Manual 27 2.8
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 2.8
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.7
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 4.9
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 26 4.9
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 25 8.6
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 25 8.6
SPBC2G2.09c |crs1|mug17|meiosis specific cyclin Crs1|Schizosacch... 25 8.6
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 8.6
>SPAC19D5.05c |||U3 snoRNP-associated protein Imp3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 175 bits (426), Expect = 5e-45
Identities = 80/169 (47%), Positives = 121/169 (71%), Gaps = 2/169 (1%)
Frame = +3
Query: 144 VXFISWKLD-NNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTES 320
V F+++K D NN +V VM+++ I KRE+Y KYN + R+LA+++ LDP + FR +
Sbjct: 15 VDFLNYKNDDNNHRDVMVMRRYHISKREEYQKYNIICGKFRQLAHRLSLLDPTDPFRLQY 74
Query: 321 SAQLLEKLYQIGLIPTRWDLA-LATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQG 497
LLEKL+ +G++P++ ++ + + S+ CRRRLPV+M + +MS+ + EAT+ IEQG
Sbjct: 75 ENLLLEKLFDMGILPSKSKMSDIENKANVSAICRRRLPVIMCKLRMSQVVSEATRLIEQG 134
Query: 498 HVRVGPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFDML 644
HVRVGP V+ DPA+LV RSLEDFVTW D S I++ + +YN+ DD+D+L
Sbjct: 135 HVRVGPHVITDPAYLVTRSLEDFVTWTDTSKIKRTIAKYNDKLDDYDLL 183
>SPAC24H6.07 |rps901|rps9-1, rps9a|40S ribosomal protein
S9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 191
Score = 50.4 bits (115), Expect = 3e-07
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = +3
Query: 150 FISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQ 329
F S +LD +E+K+ ++ ++ + + + IR A ++ LD + R
Sbjct: 19 FESARLD---AELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNA 75
Query: 330 LLEKLYQIGLIP-TRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVR 506
++ +L ++G++ TR L + F RRL + + ++++I A I Q H+R
Sbjct: 76 IIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIR 135
Query: 507 VGPEVVKDPAFLV 545
VG ++V P+F+V
Sbjct: 136 VGKQIVNVPSFVV 148
>SPBC29A3.12 |rps902|rps9-2, rps9b|40S ribosomal protein
S9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 192
Score = 48.8 bits (111), Expect = 8e-07
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = +3
Query: 150 FISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQ 329
F S +LD +E+K+ ++ ++ + + + IR A ++ LD + R
Sbjct: 19 FESARLD---AELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNA 75
Query: 330 LLEKLYQIGLIP-TRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVR 506
++ +L ++G++ +R L + F RRL + + ++++I A I Q H+R
Sbjct: 76 IIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIR 135
Query: 507 VGPEVVKDPAFLV 545
VG ++V P+F+V
Sbjct: 136 VGKQIVNVPSFVV 148
>SPCC1739.04c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 288
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/63 (22%), Positives = 33/63 (52%)
Frame = +3
Query: 171 NNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQ 350
+ IS +++ I E +TK + +++R+LA++ + DPN+ + + L+E
Sbjct: 24 SKISISELITLLDIHYSELFTKNPWMKKEVRKLASEFVENDPNHLLSKQDACHLIEAFVN 83
Query: 351 IGL 359
+ +
Sbjct: 84 VSI 86
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +3
Query: 150 FISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQ 329
F+ + + + E++ ++ +ED+ K KL++ I++ +K+ NN +++A
Sbjct: 379 FLQSERTHLLRELEELRHLATSAKEDFVKVEKLNKIIKDENENLKEYIRNNSLSFQATAG 438
Query: 330 LLEKLYQI 353
L + Q+
Sbjct: 439 ELTQCKQL 446
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 28.7 bits (61), Expect = 0.92
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 246 LSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQI 353
LS + +L +I+DL+ N+ TE A+ EKL ++
Sbjct: 417 LSHKVLKLTEEIQDLETLNQLNTEIEARQSEKLNEV 452
>SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 319
Score = 27.9 bits (59), Expect = 1.6
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 150 FISWKLDNN--ISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESS 323
FI+ ++N + + KKF Q RE +LS IRE N+I+DL N F +S
Sbjct: 5 FINSNINNEDKLPMESLKKKFLKQNREIIKINTQLSIKIRESENEIQDLIQEN-FTLKSY 63
Query: 324 AQLLEKLYQ 350
LE ++
Sbjct: 64 LVKLEARFR 72
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 648 IITYRSHLSFHYIPEHVFLLLNHQ 577
+++ +SH+ FH IP F LL HQ
Sbjct: 140 LLSIKSHVHFHLIPFINFFLLYHQ 163
>SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB complex
subunit Brf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -3
Query: 529 SFTTSGPTLTCPCSINFVASLIVSDILFRTINTGSLRLQKELAETLVAKARS 374
S T SG T C + IVS++ F +TG+ +Q L AR+
Sbjct: 21 SDTASGNTYCTQCGVVVEQDAIVSEVTFGEASTGAAVVQGSLVSNDQTHART 72
>SPBC902.03 |||Spo7 homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -2
Query: 305 FIIWIEVFYLVCELS--DITRQFVILCVILTLLYTKLFHNLHFTNIV 171
F VFY + + S D+T + +LC I+TLL F L+ T IV
Sbjct: 48 FYFGYRVFYRISKYSLIDLTYKLCLLCGIVTLLLF-YFSGLYRTTIV 93
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 144 VXFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIK 284
V +K++ +KV+KK I K E+ K + + E+ANK K
Sbjct: 678 VMLAEYKVNKKFYAIKVLKKEAILKNEELESL-KTEKHVFEVANKEK 723
>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -3
Query: 643 NISKSSLISLYSRTCFLIAEPSTHVTKSSSDLLTRNAGSFTTSGPTL 503
NI LIS+++ +L+ + +T T + S ++ N G+ +T P+L
Sbjct: 2 NIRSFLLISIFTAISYLVVDGATPRTFAPSASVSINYGTLSTVFPSL 48
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 26.2 bits (55), Expect = 4.9
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 222 EDYTKYNKLSRDIRELANKIKDLDPN-NEFRTESSAQLLEKLYQIG 356
E K NK D L N +K ++ + EF+ S+ +LEKLY+IG
Sbjct: 599 EGIVKLNKDFDDFTPL-NLLKCVNYSLMEFQKNSTFDMLEKLYEIG 643
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 4.9
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 565 KSSSDLLTRNAG-SFTTSGPTLTCPCSINFVASLIVS-DILFRTINTGSLRLQKELAETL 392
K+S+ +L++ A S G L C C + F S IV DI T ++ L L ++ TL
Sbjct: 160 KTSALILSKAASASIGNKGLFLKCSCKVGFPFSFIVPLDIGPGTYHSSKLELLYYISSTL 219
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 378 LALATNVSASSFCRRRLPVLMVRNKMSETI 467
L +N S FC R L ++ RNK+S I
Sbjct: 618 LTWVSNPSPGDFCLRDLNIVFPRNKLSIVI 647
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 465 IKEATKFIEQGHVRVGPEVVKDPAFL 542
+ A F+E H+ VGPE++ + A L
Sbjct: 459 LTRALDFLESAHMSVGPELLNNIAVL 484
>SPBC2G2.09c |crs1|mug17|meiosis specific cyclin
Crs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 229
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 339 KLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRN 449
K+Y IG + + L +V+ SFC P L +N
Sbjct: 130 KIYAIGCLFIAFKLTSDYSVAKKSFCENLAPSLSTKN 166
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 8.6
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -3
Query: 649 NYNISKSSLISLYSRTCFLIAEPSTHVTKSSSDLLTRNAGSFTTSGPTLTCPCSINFVAS 470
NYN S +S SL S + S+ +T SSS L + + S T++ PT + S + +S
Sbjct: 64 NYNTSSASSSSLTSSSA-----ASSSLT-SSSSLASSSTNSTTSASPTSSSLTSSSATSS 117
Query: 469 LIVS 458
+ S
Sbjct: 118 SLAS 121
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,875,135
Number of Sequences: 5004
Number of extensions: 57641
Number of successful extensions: 186
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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