Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_E18
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 219 9e-57
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 219 9e-57
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 219 9e-57
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 219 9e-57
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 219 9e-57
AB051628-1|BAB54955.1| 30|Homo sapiens mitochondrial ribosomal... 55 3e-07
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 48 3e-05
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 46 1e-04
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 40 0.012
AK055413-1|BAB70919.1| 224|Homo sapiens protein ( Homo sapiens ... 31 5.7
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 219 bits (535), Expect = 9e-57
Identities = 95/167 (56%), Positives = 137/167 (82%), Gaps = 1/167 (0%)
Frame = +3
Query: 144 VXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTES 320
V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA +++DL ++FR +
Sbjct: 16 VDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRA 75
Query: 321 SAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGH 500
SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M++ ++ A F+EQGH
Sbjct: 76 SAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGH 135
Query: 501 VRVGPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFDM 641
VRVGP+VV DPAFLV RS+EDFVTWVD S I++HVLEYNE RDDFD+
Sbjct: 136 VRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFDL 182
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 219 bits (535), Expect = 9e-57
Identities = 95/167 (56%), Positives = 137/167 (82%), Gaps = 1/167 (0%)
Frame = +3
Query: 144 VXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTES 320
V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA +++DL ++FR +
Sbjct: 16 VDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRA 75
Query: 321 SAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGH 500
SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M++ ++ A F+EQGH
Sbjct: 76 SAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGH 135
Query: 501 VRVGPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFDM 641
VRVGP+VV DPAFLV RS+EDFVTWVD S I++HVLEYNE RDDFD+
Sbjct: 136 VRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFDL 182
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 219 bits (535), Expect = 9e-57
Identities = 95/167 (56%), Positives = 137/167 (82%), Gaps = 1/167 (0%)
Frame = +3
Query: 144 VXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTES 320
V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA +++DL ++FR +
Sbjct: 16 VDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRA 75
Query: 321 SAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGH 500
SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M++ ++ A F+EQGH
Sbjct: 76 SAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGH 135
Query: 501 VRVGPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFDM 641
VRVGP+VV DPAFLV RS+EDFVTWVD S I++HVLEYNE RDDFD+
Sbjct: 136 VRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFDL 182
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 219 bits (535), Expect = 9e-57
Identities = 95/167 (56%), Positives = 137/167 (82%), Gaps = 1/167 (0%)
Frame = +3
Query: 144 VXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTES 320
V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA +++DL ++FR +
Sbjct: 16 VDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRA 75
Query: 321 SAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGH 500
SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M++ ++ A F+EQGH
Sbjct: 76 SAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGH 135
Query: 501 VRVGPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFDM 641
VRVGP+VV DPAFLV RS+EDFVTWVD S I++HVLEYNE RDDFD+
Sbjct: 136 VRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFDL 182
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 219 bits (535), Expect = 9e-57
Identities = 95/167 (56%), Positives = 137/167 (82%), Gaps = 1/167 (0%)
Frame = +3
Query: 144 VXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTES 320
V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA +++DL ++FR +
Sbjct: 16 VDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRA 75
Query: 321 SAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGH 500
SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M++ ++ A F+EQGH
Sbjct: 76 SAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGH 135
Query: 501 VRVGPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFDM 641
VRVGP+VV DPAFLV RS+EDFVTWVD S I++HVLEYNE RDDFD+
Sbjct: 136 VRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFDL 182
>AB051628-1|BAB54955.1| 30|Homo sapiens mitochondrial ribosomal
protein S4 protein.
Length = 30
Score = 54.8 bits (126), Expect = 3e-07
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +3
Query: 558 EDFVTWVDGSAIRKHVLEYNEMRDDFDM 641
EDFVTWVD S I++HVLEYNE RDDFD+
Sbjct: 1 EDFVTWVDSSKIKRHVLEYNEERDDFDL 28
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.4 bits (110), Expect = 3e-05
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L ++G++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRLGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H+RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 46.0 bits (104), Expect = 1e-04
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K+++++ ++ + + + IR+ A ++ LD + R LL +L IG++
Sbjct: 28 ELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKDPRRLFEGNALLWRLVCIGVL 87
Query: 363 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
+ L + F RRL + + ++++I A I Q H RV +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSF 147
Query: 540 LV 545
+V
Sbjct: 148 IV 149
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 39.5 bits (88), Expect = 0.012
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 291 DPNNEFRTESSAQLLEKLYQIGLIPT-RWDLALATNVSASSFCRRRLPVLMVRNKMSETI 467
DP F E +A LL +L +IG++ + L + F RRL + + ++++I
Sbjct: 6 DPRRLF--EGNA-LLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSI 62
Query: 468 KEATKFIEQGHVRVGPEVVKDPAFLV 545
A I Q H+RV +VV P+F+V
Sbjct: 63 HHARVLIRQRHIRVRKQVVNIPSFIV 88
>AK055413-1|BAB70919.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ30851 fis, clone FEBRA2002908. ).
Length = 224
Score = 30.7 bits (66), Expect = 5.7
Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 5/135 (3%)
Frame = +3
Query: 150 FISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQ 329
F K D N +V + K+ Y K N+ ++ KI + EF+ Q
Sbjct: 41 FYMSKKDPNFLKVTIPPFHDPLKKAQYDKDNEKRTLLQCETGKIYSI---KEFKEVEKVQ 97
Query: 330 LLEKLYQIG-----LIPTRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQ 494
L + QI + P W L L T S FCRRR RNK S ++ ++
Sbjct: 98 LHSRFPQISNSRHFITPNEW-LKLPTRYIESEFCRRR------RNKGSSFLEREPLCYQE 150
Query: 495 GHVRVGPEVVKDPAF 539
G+ E + + F
Sbjct: 151 GNNPSAKEAISEGYF 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,533,053
Number of Sequences: 237096
Number of extensions: 1977168
Number of successful extensions: 3634
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3634
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -