Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_E18
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical pr... 165 4e-41
Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 32 0.37
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 32 0.37
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 32 0.37
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 32 0.37
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 32 0.37
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 32 0.37
Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF068708-8|AAC17761.1| 327|Caenorhabditis elegans Hypothetical ... 30 2.0
U64840-5|AAB04963.2| 346|Caenorhabditis elegans Hypothetical pr... 29 2.6
U53141-6|AAA96108.1| 346|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00037-2|AAA50662.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF140272-1|AAD34863.1| 212|Caenorhabditis elegans NADH oxidored... 29 3.5
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 28 8.0
>U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical
protein C48B6.2 protein.
Length = 183
Score = 165 bits (400), Expect = 4e-41
Identities = 74/165 (44%), Positives = 111/165 (67%)
Frame = +3
Query: 150 FISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQ 329
F+SW++D + +++KF ++KRE Y YN L+ RE+A+ IK+L ++ FR++ +
Sbjct: 18 FMSWQVDQQGKQGDMLRKFYVKKREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTED 77
Query: 330 LLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRV 509
+L K Y GL+PT L V+ +SF RRRLPV+M M E++K A+ +EQGHVR+
Sbjct: 78 MLTKFYAAGLVPTSDTLERIGKVTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRI 137
Query: 510 GPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFDML 644
G ++V DPAF+V RS ED +TW S I+KHV++YN RDDFD++
Sbjct: 138 GTKLVTDPAFMVTRSSEDMITWTKASKIKKHVMDYNNTRDDFDLM 182
>Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical
protein F40F8.10 protein.
Length = 189
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 362
E+K++ F ++ + + + +R+ A ++ L+ + R LL +L +IG++
Sbjct: 27 ELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNALLRRLVKIGVL 86
Query: 363 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 539
T+ L + F RRL + + ++++I A I+Q H+RV +VV P+F
Sbjct: 87 DETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSF 146
Query: 540 LV 545
+V
Sbjct: 147 IV 148
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 NISEVKVMKKFCIQKREDYTKYNKLSRD-IRELANKIKDLDPNNEFRTESSAQLLEKLYQ 350
N E+K +F I+++ D TKY + ++ +R+ A+ K + N ESSAQL K +
Sbjct: 4718 NGQEIKPNSRFIIEQKTD-TKYQLVIKNAVRDDADTYKIVLENTAGEAESSAQLTVKKAK 4776
Query: 351 IGL 359
GL
Sbjct: 4777 AGL 4779
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 NISEVKVMKKFCIQKREDYTKYNKLSRD-IRELANKIKDLDPNNEFRTESSAQLLEKLYQ 350
N E+K +F I+++ D TKY + ++ +R+ A+ K + N ESSAQL K +
Sbjct: 4078 NGQEIKPNSRFIIEQKTD-TKYQLVIKNAVRDDADTYKIVLENTAGEAESSAQLTVKKAK 4136
Query: 351 IGL 359
GL
Sbjct: 4137 AGL 4139
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 NISEVKVMKKFCIQKREDYTKYNKLSRD-IRELANKIKDLDPNNEFRTESSAQLLEKLYQ 350
N E+K +F I+++ D TKY + ++ +R+ A+ K + N ESSAQL K +
Sbjct: 4718 NGQEIKPNSRFIIEQKTD-TKYQLVIKNAVRDDADTYKIVLENTAGEAESSAQLTVKKAK 4776
Query: 351 IGL 359
GL
Sbjct: 4777 AGL 4779
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 NISEVKVMKKFCIQKREDYTKYNKLSRD-IRELANKIKDLDPNNEFRTESSAQLLEKLYQ 350
N E+K +F I+++ D TKY + ++ +R+ A+ K + N ESSAQL K +
Sbjct: 4718 NGQEIKPNSRFIIEQKTD-TKYQLVIKNAVRDDADTYKIVLENTAGEAESSAQLTVKKAK 4776
Query: 351 IGL 359
GL
Sbjct: 4777 AGL 4779
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 NISEVKVMKKFCIQKREDYTKYNKLSRD-IRELANKIKDLDPNNEFRTESSAQLLEKLYQ 350
N E+K +F I+++ D TKY + ++ +R+ A+ K + N ESSAQL K +
Sbjct: 4078 NGQEIKPNSRFIIEQKTD-TKYQLVIKNAVRDDADTYKIVLENTAGEAESSAQLTVKKAK 4136
Query: 351 IGL 359
GL
Sbjct: 4137 AGL 4139
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 NISEVKVMKKFCIQKREDYTKYNKLSRD-IRELANKIKDLDPNNEFRTESSAQLLEKLYQ 350
N E+K +F I+++ D TKY + ++ +R+ A+ K + N ESSAQL K +
Sbjct: 4718 NGQEIKPNSRFIIEQKTD-TKYQLVIKNAVRDDADTYKIVLENTAGEAESSAQLTVKKAK 4776
Query: 351 IGL 359
GL
Sbjct: 4777 AGL 4779
>Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical
protein T10G3.4 protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -2
Query: 317 LCPE-FIIWIEVFYLVCELSDITRQFVILCVILTLLYTKLFH 195
LCP +++ I +F +V L + FV+LC++LT +++K FH
Sbjct: 5 LCPSNYLLSINIFSIVLTLPMVII-FVLLCILLT-IHSKTFH 44
>Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical
protein F08B12.1 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 198 KKFCIQKREDYTK--YNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGL 359
KK+ + K +D+ K YN+L +R + ++ P + F + S + LEKL + +
Sbjct: 572 KKYHLNKLQDFEKDAYNQLQISLRTTMENMPEIRPLDAFISRSELRDLEKLASVNV 627
>AF068708-8|AAC17761.1| 327|Caenorhabditis elegans Hypothetical
protein C18G1.9 protein.
Length = 327
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -2
Query: 308 EFIIWIE--VFYLVCELSDITRQFVILCVILTLLYTKL 201
+FI+ + VF+ V + +D+T QF I C++LT L K+
Sbjct: 258 DFIVSVTKLVFHEVFKTADVTGQFEITCLMLTSLMNKV 295
>U64840-5|AAB04963.2| 346|Caenorhabditis elegans Hypothetical
protein ZC317.6 protein.
Length = 346
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -2
Query: 308 EFIIWIE--VFYLVCELSDITRQFVILCVILTLLYTKL 201
+FI+ + VF+ V + +D+T QF I C++LT L K+
Sbjct: 258 DFIVSVTKLVFHEVFKTADVTGQFEITCLMLTSLTNKV 295
>U53141-6|AAA96108.1| 346|Caenorhabditis elegans Hypothetical
protein C14C11.1 protein.
Length = 346
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -2
Query: 308 EFIIWIE--VFYLVCELSDITRQFVILCVILTLLYTKL 201
+FI+ + VF+ V + +D+T QF I C++LT L K+
Sbjct: 258 DFIVSVTKLVFHEVFKTADVTGQFEITCLMLTSLTNKV 295
>U00037-2|AAA50662.1| 212|Caenorhabditis elegans Hypothetical
protein T20H4.5 protein.
Length = 212
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 294 PNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCR 419
PN E+ TE+ +LL ++ L RW+ LA+N+ A R
Sbjct: 171 PNFEYSTETHEELLYNKEKLLLNGDRWEPELASNLQAEYLYR 212
>AF140272-1|AAD34863.1| 212|Caenorhabditis elegans NADH
oxidoreductase complex I 23.8kDa subunit protein.
Length = 212
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 294 PNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCR 419
PN E+ TE+ +LL ++ L RW+ LA+N+ A R
Sbjct: 171 PNFEYSTETHEELLYNKEKLLLNGDRWEPELASNLQAEYLYR 212
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 162 KLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEK 341
+L ISE+++ K ++ E K +K + D LAN+I L E T S QL ++
Sbjct: 408 QLSGQISELEIQLKSELKNVEHLNKEHKKAID---LANEISKLKTEIERETSISKQLEKE 464
Query: 342 LYQI 353
+ Q+
Sbjct: 465 ISQL 468
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,890,416
Number of Sequences: 27780
Number of extensions: 323550
Number of successful extensions: 1022
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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