Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_E17
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 109 2e-24
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical p... 87 2e-17
Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical pr... 87 2e-17
Z81549-6|CAB04475.1| 523|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 29 5.0
U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92830-16|CAO82027.1| 197|Caenorhabditis elegans Hypothetical p... 28 6.6
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 28 6.6
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 28 6.6
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 109 bits (263), Expect = 2e-24
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 4/209 (1%)
Frame = +3
Query: 171 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNV 350
+++ V NI+ AT+D + +F YLGKI D+++YP+ +++ + ++K+ D V V
Sbjct: 10 KILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEV 69
Query: 351 AQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL-D 527
AQH+TNTV ID A++ +P + IPDE +S G+ G + +LP HV N + +
Sbjct: 70 AQHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKIQE 123
Query: 528 GIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVAD-TGSLTSQQLIDHF 704
+ ++ T D L G DS K+EEIRRTV V + + ++++ F
Sbjct: 124 SDDGSALLITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELF 183
Query: 705 -CQAGEVKYMRFCS-XDVDTLKYALIEMT 785
GEV Y R S D YA +E +
Sbjct: 184 NMYFGEVMYARMASGPDALPCAYAYVEFS 212
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 109 bits (263), Expect = 2e-24
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 4/209 (1%)
Frame = +3
Query: 171 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNV 350
+++ V NI+ AT+D + +F YLGKI D+++YP+ +++ + ++K+ D V V
Sbjct: 10 KILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEV 69
Query: 351 AQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL-D 527
AQH+TNTV ID A++ +P + IPDE +S G+ G + +LP HV N + +
Sbjct: 70 AQHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKIQE 123
Query: 528 GIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVAD-TGSLTSQQLIDHF 704
+ ++ T D L G DS K+EEIRRTV V + + ++++ F
Sbjct: 124 SDDGSALLITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELF 183
Query: 705 -CQAGEVKYMRFCS-XDVDTLKYALIEMT 785
GEV Y R S D YA +E +
Sbjct: 184 NMYFGEVMYARMASGPDALPCAYAYVEFS 212
>Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Frame = +3
Query: 171 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNV 350
+++ V NI+ AT+D + +F YLGKI D+++YP+ +++ + ++K+ D V V
Sbjct: 10 KILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEV 69
Query: 351 AQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL 524
AQH+TNTV ID A++ +P + IPDE +S G+ G + +LP HV N +
Sbjct: 70 AQHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKI 121
>Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/118 (35%), Positives = 70/118 (59%)
Frame = +3
Query: 171 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNV 350
+++ V NI+ AT+D + +F YLGKI D+++YP+ +++ + ++K+ D V V
Sbjct: 10 KILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEV 69
Query: 351 AQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL 524
AQH+TNTV ID A++ +P + IPDE +S G+ G + +LP HV N +
Sbjct: 70 AQHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKI 121
>Z81549-6|CAB04475.1| 523|Caenorhabditis elegans Hypothetical
protein F55C9.7 protein.
Length = 523
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = -3
Query: 785 SHLNKSILEGVNIXAAEAHILHFTC----LAEVINQLLGS**TRISH*DCSSDFFYFSRV 618
SH KSI E ++ A L+F L ++NQ GS + D + + +++
Sbjct: 350 SHNWKSIHEALDGVACSHTSLYFQSQDVWLQRIVNQFSGS----FLYLDLDVNSIWNNQI 405
Query: 617 ICGWQRGIWRQTSCCQISVVRLNDLVRRDSIQSID 513
+C +R ++ TSC ++ V L ++++D
Sbjct: 406 MCTNRRNLYISTSCTELLSVNCTHLHVNQRVRAVD 440
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 174 VIQVTNIAPQATKDQMQTLFGYLGKIDDIRL 266
++ VTNI +AT+D + F GKI +I L
Sbjct: 56 IVFVTNIHEEATEDDVHDKFSEYGKIKNIHL 86
>U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical
protein C34G6.1 protein.
Length = 1768
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 174 VIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVN-V 350
+I++ N++ + +FG++ IR YP I + +CY + +++ +
Sbjct: 755 LIELENVSKWEHARKSSGIFGFIKDTMPIRQYPDIEMIHLRATLMLCYGHVVMACSLDTI 814
Query: 351 AQHMTNTVFI 380
Q + NT+ +
Sbjct: 815 TQRLQNTIIV 824
>Z92830-16|CAO82027.1| 197|Caenorhabditis elegans Hypothetical
protein F11A5.17 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 356 LCHIYVCRVIIFYVTDAGLYGTRNVSDRWIQADVVDFTQI 237
+C I+V V+ F + YG R DRW+ +++ FT I
Sbjct: 1 MCRIFVL-VLSFAILICIGYGQRPKLDRWVFRELLQFTNI 39
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 159 SGSTRVIQVTNIAPQATKDQMQTLFGYLGKI 251
S R I V+NI+ + T+ Q+Q+ F GKI
Sbjct: 108 SRDDRKIVVSNISAKVTQSQLQSFFSQYGKI 138
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = -3
Query: 455 TGHFERFVF----IWYLTRLHRYHNQCAVYEYSVSHMLCHIYVC--RVIIFYVTDAGLYG 294
TGHF R + YL L+RY QCA+ ++ + C ++ T + +Y
Sbjct: 248 TGHFPRVTLCDFEVRYLANLNRYTVQCALLINIINEKVFAFLWCWYMILAIITTCSFIYW 307
Query: 293 TRNVSDRWIQAD-VVDFTQIAE 231
N + D V+ F QIAE
Sbjct: 308 IANSFIHSEKVDYVMKFIQIAE 329
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = -3
Query: 455 TGHFERFVF----IWYLTRLHRYHNQCAVYEYSVSHMLCHIYVC--RVIIFYVTDAGLYG 294
TGHF R + YL L+RY QCA+ ++ + C ++ T + +Y
Sbjct: 264 TGHFPRVTLCDFEVRYLANLNRYTVQCALLINIINEKVFAFLWCWYMILAIITTCSFIYW 323
Query: 293 TRNVSDRWIQAD-VVDFTQIAE 231
N + D V+ F QIAE
Sbjct: 324 IANSFIHSEKVDYVMKFIQIAE 345
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,777,797
Number of Sequences: 27780
Number of extensions: 371300
Number of successful extensions: 913
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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