Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_E15
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 148 1e-35
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 148 1e-35
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 148 1e-35
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 148 1e-35
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 148 1e-35
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 148 1e-35
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 136 3e-32
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 55 2e-07
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 148 bits (358), Expect = 1e-35
Identities = 64/97 (65%), Positives = 79/97 (81%)
Frame = +2
Query: 119 VNLHKRLHGVGFKKRAPXAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXX 298
+N+HKR+HGVGFKKRAP A+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+
Sbjct: 23 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 82
Query: 299 XXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 409
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 83 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 148 bits (358), Expect = 1e-35
Identities = 64/97 (65%), Positives = 79/97 (81%)
Frame = +2
Query: 119 VNLHKRLHGVGFKKRAPXAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXX 298
+N+HKR+HGVGFKKRAP A+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 299 XXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 409
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 148 bits (358), Expect = 1e-35
Identities = 64/97 (65%), Positives = 79/97 (81%)
Frame = +2
Query: 119 VNLHKRLHGVGFKKRAPXAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXX 298
+N+HKR+HGVGFKKRAP A+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 299 XXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 409
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 148 bits (358), Expect = 1e-35
Identities = 64/97 (65%), Positives = 79/97 (81%)
Frame = +2
Query: 119 VNLHKRLHGVGFKKRAPXAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXX 298
+N+HKR+HGVGFKKRAP A+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 299 XXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 409
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 148 bits (358), Expect = 1e-35
Identities = 64/97 (65%), Positives = 79/97 (81%)
Frame = +2
Query: 119 VNLHKRLHGVGFKKRAPXAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXX 298
+N+HKR+HGVGFKKRAP A+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 299 XXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 409
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 148 bits (358), Expect = 1e-35
Identities = 64/97 (65%), Positives = 79/97 (81%)
Frame = +2
Query: 119 VNLHKRLHGVGFKKRAPXAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXX 298
+N+HKR+HGVGFKKRAP A+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 299 XXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 409
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 136 bits (330), Expect = 3e-32
Identities = 58/89 (65%), Positives = 73/89 (82%)
Frame = +2
Query: 119 VNLHKRLHGVGFKKRAPXAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXX 298
+N+HKR+HGVGFKKRAP A+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+
Sbjct: 27 INIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRV 86
Query: 299 XXXXXXNDDEDSAHKLFTLVTYVPVASIK 385
N+DEDS +KL+TLVTYVPV + K
Sbjct: 87 RLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 54.8 bits (126), Expect = 2e-07
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +2
Query: 275 NVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 409
NVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,668,098
Number of Sequences: 237096
Number of extensions: 1032127
Number of successful extensions: 1694
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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