Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_E14
         (381 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1181 - 24985963-24986242,24987109-24987197                       98   2e-21
06_02_0140 + 12255418-12255512,12257514-12257793                       98   2e-21
02_05_0532 - 29814199-29814478,29814922-29814969,29815558-29815649     85   2e-17
07_03_0256 - 15875066-15877025,15877292-15877911                       27   5.0  
01_03_0147 - 13125065-13126679,13126802-13127664                       27   6.6  

>08_02_1181 - 24985963-24986242,24987109-24987197
          Length = 122

 Score = 98.3 bits (234), Expect = 2e-21
 Identities = 48/96 (50%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
 Frame = +3

Query: 6   HKRLHGVGFXKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVRNVPFXXXXXXX 185
           HKRLH   F K+AP+AIK IRKFA+K  GT D+RV  +LNK +WS G+R+VP        
Sbjct: 24  HKRLHSCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSSGIRSVPRRVRVRIA 83

Query: 186 XXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 287
              ND+ED+  +L++LVT   VP   +KGL T+ VD
Sbjct: 84  RKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTKVVD 119


>06_02_0140 + 12255418-12255512,12257514-12257793
          Length = 124

 Score = 98.3 bits (234), Expect = 2e-21
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
 Frame = +3

Query: 6   HKRLHGVGFXKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVRNVPFXXXXXXX 185
           HKRLHG  F K+AP+AIK IRKFA+K  GT D+RV  +LNK +WS G+R+VP        
Sbjct: 26  HKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRVDVKLNKHIWSSGIRSVPRRVRVRIA 85

Query: 186 XXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 287
              ND+ED+  +L++LVT   VP   +KGL T+ V+
Sbjct: 86  RRRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKLVE 121


>02_05_0532 - 29814199-29814478,29814922-29814969,29815558-29815649
          Length = 139

 Score = 84.6 bits (200), Expect = 2e-17
 Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
 Frame = +3

Query: 30  FXKRAPSAIKAIRKFAEKQXGTPDIRVXTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDED 209
           F K+AP+AIK IRKFA+K  GT DIR+  +LNK +W+ G+R+VP           ND+ED
Sbjct: 49  FKKKAPNAIKEIRKFAQKAMGTTDIRIDVKLNKAIWTNGIRSVPRRVRVRISRKRNDEED 108

Query: 210 SAHKLFTLVTY--VPVASIKGLQTENVD 287
           +  +L++LVT   +P   +KGL T+ V+
Sbjct: 109 AKEELYSLVTVAEIPAEGLKGLGTKVVE 136


>07_03_0256 - 15875066-15877025,15877292-15877911
          Length = 859

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 170 DTEGNISDSLRPKEFV*AGXYSNVRSSXLFFSELSDCFDCA 48
           DT+G IS  LR    V  G       +   + E+ + FDC+
Sbjct: 119 DTQGGISQRLRTMAIVGCGGLGKTTLANQVYLEVKNQFDCS 159


>01_03_0147 - 13125065-13126679,13126802-13127664
          Length = 825

 Score = 26.6 bits (56), Expect = 6.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 157 TFLTPLDQRNLFKRVXTRMSGVPXCFS 77
           ++LT L  RNL + +  R +G P C++
Sbjct: 481 SYLTDLISRNLIQALHLRHNGTPSCYT 507


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,702,225
Number of Sequences: 37544
Number of extensions: 119738
Number of successful extensions: 197
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)