Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_E12
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p...    43   3e-04
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr...    43   3e-04
Z29117-16|CAE17732.1|  100|Caenorhabditis elegans Hypothetical p...    39   0.005
Z22176-15|CAE18056.1|  100|Caenorhabditis elegans Hypothetical p...    39   0.005
AL023816-1|CAA19430.2|  250|Caenorhabditis elegans Hypothetical ...    30   2.1  
U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z49125-4|CAA88936.1|  644|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
           protein ZK328.7b protein.
          Length = 1098

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
 Frame = +3

Query: 447 NIHYYLREKYYGNVKKISNEALQQNPRNSEFIFYTGIALILEGQVHKGISELTPLQSDSE 626
           N+HYY RE Y+G    + +  L    ++       G+ L L G++   I  L    +D++
Sbjct: 31  NVHYYAREGYFGTAILVCDGRL-ATIKDPALAILKGVCLTLLGKIPDAIRHLETFVTDND 89

Query: 627 IQLAVIIALVYAYKVSNLPEKEVLFNLXSKL--KEEKKHASITSY 755
           + L  + AL +A+  +  P+ + +  + +++  +   +    TSY
Sbjct: 90  VALGALHALKWAHASAFNPDNKSIVEIETEISTRARNEKTPYTSY 134


>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical
           protein ZK328.7a protein.
          Length = 1332

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
 Frame = +3

Query: 447 NIHYYLREKYYGNVKKISNEALQQNPRNSEFIFYTGIALILEGQVHKGISELTPLQSDSE 626
           N+HYY RE Y+G    + +  L    ++       G+ L L G++   I  L    +D++
Sbjct: 31  NVHYYAREGYFGTAILVCDGRL-ATIKDPALAILKGVCLTLLGKIPDAIRHLETFVTDND 89

Query: 627 IQLAVIIALVYAYKVSNLPEKEVLFNLXSKL--KEEKKHASITSY 755
           + L  + AL +A+  +  P+ + +  + +++  +   +    TSY
Sbjct: 90  VALGALHALKWAHASAFNPDNKSIVEIETEISTRARNEKTPYTSY 134


>Z29117-16|CAE17732.1|  100|Caenorhabditis elegans Hypothetical
           protein ZK1098.11 protein.
          Length = 100

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +2

Query: 179 GEDAVISY-EKKGKGITLIHTNVPQAFQGKGVGKLLAQYAFDHALENRLNVICKCHFLAK 355
           G  A + Y E   + +   HT  P+  QGKGV K+L +    +A +N+  V   C ++AK
Sbjct: 21  GSKAYLEYAELPNRVLDFQHTVTPEDQQGKGVAKILVKEGLKYAADNKYLVQPTCWYVAK 80

Query: 356 FYE 364
           + +
Sbjct: 81  YLD 83


>Z22176-15|CAE18056.1|  100|Caenorhabditis elegans Hypothetical
           protein ZK1098.11 protein.
          Length = 100

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +2

Query: 179 GEDAVISY-EKKGKGITLIHTNVPQAFQGKGVGKLLAQYAFDHALENRLNVICKCHFLAK 355
           G  A + Y E   + +   HT  P+  QGKGV K+L +    +A +N+  V   C ++AK
Sbjct: 21  GSKAYLEYAELPNRVLDFQHTVTPEDQQGKGVAKILVKEGLKYAADNKYLVQPTCWYVAK 80

Query: 356 FYE 364
           + +
Sbjct: 81  YLD 83


>AL023816-1|CAA19430.2|  250|Caenorhabditis elegans Hypothetical
           protein T05G11.2 protein.
          Length = 250

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -3

Query: 495 FS*HYHSIFPVNNNEYYIYAKPNPWLNYSNSSFTFSTLYLLMLSS*NLAKK 343
           FS  Y    PVN N   IY++    + Y+ SSF   T  L+M  S NL  K
Sbjct: 28  FSIFYFKRIPVNPNMILIYSRFGIDVIYTYSSFMVVTYILIMTLSTNLRIK 78


>U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical
           protein F37C12.7 protein.
          Length = 731

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +2

Query: 62  RFENSFSCLGMLTRARAFSTEALKVVNNVAKQQFAVSIKGEDAVISYEKKGKGITLIHTN 241
           +F++  S  G+LTR +    E+  V +++A   +     G+          KG+ L+H N
Sbjct: 262 QFKHVLSLSGLLTRNQEQVKESTAVKSDIALIMYTSGTTGQP---------KGVILLHQN 312

Query: 242 VPQAFQGKGVG 274
           V  A  G+G G
Sbjct: 313 VVAALLGQGDG 323


>Z49125-4|CAA88936.1|  644|Caenorhabditis elegans Hypothetical
           protein C47G2.4 protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 435 WHRCNIHYYLREKYYGNVKKISNE 506
           WH  N HY LR+ Y+ +++K+++E
Sbjct: 204 WHHGNRHYRLRKTYF-DIEKLASE 226


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,555,923
Number of Sequences: 27780
Number of extensions: 336104
Number of successful extensions: 764
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)