Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_E12
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.2  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    23   4.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.2  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   5.6  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   5.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 274  PNSFSLKSLRHICMDQGYPLAFLLIADHSIFSFY 173
            PNS +L    H+  D G P+ +  I    I  F+
Sbjct: 1510 PNSTTLVLRLHVWPDNGCPILYFTIQYRPINEFH 1543


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 274  PNSFSLKSLRHICMDQGYPLAFLLIADHSIFSFY 173
            PNS +L    H+  D G P+ +  I    I  F+
Sbjct: 1506 PNSTTLVLRLHVWPDNGCPILYFTIQYRPINEFH 1539


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 655 FMHTKFLIYQKKRCCSIXNQN*RKKRNMQA*LH 753
           F HT     +++RC    N+  RKK      LH
Sbjct: 224 FQHTSSRYSRERRCSRDRNREYRKKDRQYEKLH 256


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 591 ISELTPLQSDSEIQLAVIIALVYAYKVSNLPE 686
           I +++ L S     L ++I+ VYA K   +PE
Sbjct: 669 IQDMSFLFSQLYNALLILISTVYAVKTRKIPE 700


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 591 ISELTPLQSDSEIQLAVIIALVYAYKVSNLPE 686
           I +++ L S     L ++I+ VYA K   +PE
Sbjct: 759 IQDMSFLFSQLYNALLILISTVYAVKTRKIPE 790


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 686 KRGVVQFXIKIEGRKETCKHNFI 754
           KRGV+ F I ++ +K+T   +++
Sbjct: 204 KRGVMDFQIGLQRKKDTTFDDYL 226


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 686 KRGVVQFXIKIEGRKETCKHNFI 754
           KRGV+ F I ++ +K+T   +++
Sbjct: 204 KRGVMDFQIGLQRKKDTTFDDYL 226


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 423 WLNYSNSSF 397
           WL YSNS+F
Sbjct: 312 WLGYSNSAF 320


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,856
Number of Sequences: 438
Number of extensions: 4619
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)