BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_E09
(528 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 27 0.51
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 25 1.2
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 26.6 bits (56), Expect = 0.51
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 266 CCHSYCSSMANVPTQSSELA 325
CCH +C+ PTQS LA
Sbjct: 201 CCHLFCAGGCTGPTQSDCLA 220
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 25.4 bits (53), Expect = 1.2
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -3
Query: 394 F*DNGFHFFPFLAAGLSSPFLGTCQFRGLRRYIGHGGTVRMAASRN 257
F D G F P L G + + + +RGLR I H + + ++
Sbjct: 277 FHDVGLLFLPLLTMGFAYSMIVSKLWRGLRHEIKHSSLYQQTSRQH 322
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,393
Number of Sequences: 2352
Number of extensions: 7581
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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