Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_E07
(759 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 274 9e-75
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 105 7e-24
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 103 3e-23
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 101 1e-22
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 92 7e-20
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 87 3e-18
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 67 3e-12
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 66 7e-12
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 64 2e-11
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 56 5e-09
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 55 1e-08
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 50 3e-07
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 47 3e-06
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 47 3e-06
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 45 1e-05
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 41 2e-04
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 40 4e-04
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 38 0.002
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 38 0.002
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 31 0.24
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 30 0.31
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 29 0.54
SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|ch... 29 0.72
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 28 1.7
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 27 2.2
SPCC895.08c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.9
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 2.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.9
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 3.8
SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box as... 27 3.8
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 3.8
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 27 3.8
SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr... 27 3.8
SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting... 26 5.1
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 6.7
SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 6.7
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 274 bits (672), Expect = 9e-75
Identities = 128/212 (60%), Positives = 166/212 (78%), Gaps = 1/212 (0%)
Frame = +2
Query: 119 GXEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK 298
G + + +E+L DE+ SRTRLL+N+IK+MKSE R++HE +KIKEN EKI NK
Sbjct: 23 GLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNK 82
Query: 299 TLPYLVSNVIELLDVDPQEEE-EDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAE 475
LPYLV NV+E+LD+ P E + ++ A + ++ R GK AVIKTSTRQT FLP+IGLV+ E
Sbjct: 83 MLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPE 142
Query: 476 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVV 655
+L PGDL+GVNKDSYLI++ LP+EYD+RVKAMEVDE+PTE+YSDIGGL KQI+EL EA+V
Sbjct: 143 ELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIV 202
Query: 656 LPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
LPM +KF LG+ PPKG L++GPP TG+ +
Sbjct: 203 LPMQQADKFRKLGVKPPKGCLMFGPPGTGKTL 234
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 105 bits (252), Expect = 7e-24
Identities = 47/112 (41%), Positives = 72/112 (64%)
Frame = +2
Query: 410 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 589
A++ ++T Y + ++ +D E LKP V + + S +++ LP E D+ + + DERP
Sbjct: 70 AIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERP 129
Query: 590 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGE 745
Y+D+GGLD Q QE+ EAV LP+T + + +GI PP+GVLLYGPP TG+
Sbjct: 130 DVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGK 181
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 103 bits (247), Expect = 3e-23
Identities = 48/114 (42%), Positives = 76/114 (66%)
Frame = +2
Query: 410 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 589
A++ T+ + Y++ ++ VD + L+PG V ++ + I+ L + D + M++D+ P
Sbjct: 128 AIVSTAGPE-YYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAP 186
Query: 590 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
TE Y+DIGGL+ QIQE+ EAV LP+TH E + +GI PPKGV+LYG P TG+ +
Sbjct: 187 TESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTL 240
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 101 bits (242), Expect = 1e-22
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Frame = +2
Query: 185 LLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 364
L N ++ ++ V + ++Q I + T+ ++ + ++ + LL + Q +E
Sbjct: 5 LKTNVLQSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQE 64
Query: 365 DGAVVDLDSQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP 541
G+ V + GK V +K Y + + +D +++KP V + DSY +++ LP
Sbjct: 65 PGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILP 124
Query: 542 AEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLL 721
+ D V M V++ P Y +GGL+KQI+E+ E + LP+ H E F +LGI PKG+LL
Sbjct: 125 NKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILL 184
Query: 722 YGPPXTGEDI 751
YGPP TG+ +
Sbjct: 185 YGPPGTGKTL 194
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 92.3 bits (219), Expect = 7e-20
Identities = 42/96 (43%), Positives = 60/96 (62%)
Frame = +2
Query: 464 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 643
V ++ G VG +++ Y I LP + D V M+V+E+P Y D+GG +QI+ L
Sbjct: 133 VSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLR 192
Query: 644 EAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
E V LP+ E+FV LGI PPKG++LYGPP TG+ +
Sbjct: 193 EVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTL 228
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 86.6 bits (205), Expect = 3e-18
Identities = 46/123 (37%), Positives = 71/123 (57%)
Frame = +2
Query: 383 LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARV 562
LDS+R ++K S+ Y + VD L G V ++ + I+ LP E D V
Sbjct: 63 LDSER----FIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLV 118
Query: 563 KAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTG 742
M +++ ++ +GGL++QI+EL E + LP+ + E F+ +GI PPKGVLLYGPP TG
Sbjct: 119 YNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTG 178
Query: 743 EDI 751
+ +
Sbjct: 179 KTL 181
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 66.9 bits (156), Expect = 3e-12
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 557 RVKAMEVDERPTE-QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPP 733
R KA E P++ SDIGGLD I EL+E V +P+ H E + GIHPP+GVLL+GPP
Sbjct: 158 RQKAEANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPP 217
Query: 734 XTGE 745
G+
Sbjct: 218 GCGK 221
Score = 43.2 bits (97), Expect = 4e-05
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 587 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
P +++IG L EL A+V P+ E + ++GI P GVLL+GPP G+ +
Sbjct: 487 PGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTL 541
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 65.7 bits (153), Expect = 7e-12
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +2
Query: 581 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
E P +SDIGG ++ Q+L E+V P+TH E F LG+ PPKGVLLYGPP + I
Sbjct: 541 ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTI 597
Score = 54.8 bits (126), Expect = 1e-08
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2
Query: 599 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGE 745
+S IGGL QI ++ + V LP + E F I PP+GVLLYGPP TG+
Sbjct: 278 FSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGK 326
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 64.1 bits (149), Expect = 2e-11
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 395 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAM- 571
RKG V++ S RQ F +VD + P + V++D+ + E P + ++
Sbjct: 167 RKGDLFVVRGSMRQVEFK----VVD---VAPDEFGIVSQDTIIHWEGEPINREDEESSLA 219
Query: 572 EVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
EV Y DIGG +Q+ ++ E V LP+ H + F ++GI PP+G+L+YGPP TG+ +
Sbjct: 220 EVG------YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTL 273
Score = 63.7 bits (148), Expect = 3e-11
Identities = 36/96 (37%), Positives = 57/96 (59%)
Frame = +2
Query: 464 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELI 643
+DAE L D +GV D++ L + + ++ V E P ++ DIGGL++ +EL
Sbjct: 457 IDAEVL---DSLGVTMDNFRF--ALGSSNPSALRETVV-EVPNVRWEDIGGLEEVKRELR 510
Query: 644 EAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
E V +P+ + EKF+ G+ P KGVL +GPP TG+ +
Sbjct: 511 ETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTL 546
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 56.0 bits (129), Expect = 5e-09
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +2
Query: 584 RPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
R ++ IGGL+ I +L E V+LP+ + E F++L I PP+GVL +GPP TG+ +
Sbjct: 366 RENLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTL 421
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 55.2 bits (127), Expect = 1e-08
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 599 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
+ +GGLD I +L E V+LP+ + E F + PP+GVL +GPP TG+ +
Sbjct: 265 FESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTL 315
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 50.4 bits (115), Expect = 3e-07
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = +2
Query: 527 LETLPA-EYDARVKAMEVDERPTE-QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLG-- 694
LETL EY+ V + V + + DIGG+D+ + +L++ V+ P+ + E F G
Sbjct: 62 LETLELNEYEQIVASQLVLPSEIDVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGL 121
Query: 695 IHPPKGVLLYGPPXTGE 745
+ PKG+LLYGPP G+
Sbjct: 122 LSCPKGLLLYGPPGCGK 138
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 46.8 bits (106), Expect = 3e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 581 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGE 745
E+P ++ DI GL+ + L E V+LP+ + F + G P G+LLYGPP TG+
Sbjct: 122 EKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGK 175
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 46.8 bits (106), Expect = 3e-06
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2
Query: 587 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
P + DIGGL++ L + + LP+ E F + G+ P GVLLYGPP TG+ +
Sbjct: 650 PKVNWDDIGGLEEAKTVLRDTLQLPLQFPELF-SQGLKPRSGVLLYGPPGTGKTL 703
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +2
Query: 599 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGE 745
+SDI GLD L EAV+ P E F L P +G+LL+GPP TG+
Sbjct: 378 WSDIAGLDDAKNSLKEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGK 425
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 40.7 bits (91), Expect = 2e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +2
Query: 599 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGE 745
+ DI GL+ L EAVV P + F L P +G+LL+GPP TG+
Sbjct: 458 WDDISGLEFAKHSLKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGK 505
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 39.9 bits (89), Expect = 4e-04
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +2
Query: 596 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGE 745
++SD+ G+D+ +EL E +V + F LG P+GVLL GPP TG+
Sbjct: 265 RFSDVQGVDEAKEEL-EEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGK 313
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +2
Query: 596 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGEDI 751
+++D+ G+D+ +E++E V + + + + LG P+G +L GPP TG+ +
Sbjct: 294 KFADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTL 344
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 608 IGGLDKQIQELIEAVVLPMTHKEKFVN-LGIHPPKGVLLYGPPXTGEDI 751
IGGLD + + V LGI+ KG+LLYGPP TG+ +
Sbjct: 271 IGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTL 319
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = +2
Query: 128 ALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 307
ALS+ + +PT+ +LL ++M ++ +++ D + E +K +++ LP
Sbjct: 406 ALSQIAVEIPTEVSKHHAQLLPLVFELMSTQGVKVGKSACNCIDALLEGLDKSEISGYLP 465
Query: 308 YLVSNVIELLD 340
L+ ++ LL+
Sbjct: 466 MLMERLVGLLE 476
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 30.3 bits (65), Expect = 0.31
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 191 DNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDG 370
DNE K MK E + + Q + ++ + ++K+K K ++ + EEEED
Sbjct: 89 DNEAKKMKREKEILRQQRQKRKSELTQLSQKVK-EKFKKMRKKPARRIVTIANDEEEEDD 147
Query: 371 AVVDLDS-QRKGKCAVIK 421
+D D+ +RK +K
Sbjct: 148 QTMDEDAFERKSMQGELK 165
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 29.5 bits (63), Expect = 0.54
Identities = 26/117 (22%), Positives = 50/117 (42%)
Frame = +2
Query: 128 ALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 307
+L EEV R PTD+ + D + + K+E + I Q ++IK + LP
Sbjct: 715 SLPEEVSRQPTDDKGEQVSNADVDSGLSKTERLTIQ-----QTNEIKHVPTNTTSSVKLP 769
Query: 308 YLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEK 478
SN E + + + ++ L+SQ + +++ + +G+ + EK
Sbjct: 770 QQPSNEDEKERITTADYADSTSLERLESQEPNRNELVQVGSSNAGNTTSVGMNEHEK 826
>SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 530
Score = 29.1 bits (62), Expect = 0.72
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 424 FNPANIFLARHRLGRCRETQTRRLGRSQQRLLFDLRNAP 540
F+ +FL R CR+ RR +++Q LL++ R+AP
Sbjct: 298 FHKLRLFLMERRYYYCRQRSVRRKEKTRQLLLYE-RSAP 335
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 185 LLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 364
L+D +IM++E R + ++ + I + + N +LP+ I+L+D + E
Sbjct: 1114 LIDGHSEIMENERRRPKYRIRLSGNPILGDGKSDNQNMSLPFYRGEYIQLIDANQDNYLE 1173
Query: 365 D 367
+
Sbjct: 1174 E 1174
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -3
Query: 508 VDSY--QVSWFEFLCIYQADDG 449
VD+Y SW+E LC Y A+DG
Sbjct: 75 VDNYILSYSWYERLCSYLAEDG 96
>SPCC895.08c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 490
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 360 KKTAPLSI*THSVKGNAL*SRLQPGKHISCPSSAW 464
+K AP + TH K N+L S +P S S +W
Sbjct: 352 RKLAPPFLRTHKAKSNSLFSMKRPSSSSSSLSGSW 386
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 191 DNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELL---DVDPQEEE 361
DN++ +++ +M + + N+K+ E + +KTL ++ S ++ L DV EE
Sbjct: 700 DNDMASLEAPMMSHNTDTDTLNNKLNEKDNVVFEDKTLQHVASEIVPNLPPADVGELNEE 759
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 203 KIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVI 328
+++ +E+ R+S L Q ++ +TEK ++N L SNV+
Sbjct: 1128 EMLNAELQRVSQSLPPQMSRVVHDTEK-RLNMLFDRLNSNVL 1168
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 194 NEIKIMKSEVMRISHELQAQNDKIKENTEKI 286
NE+K+ K + + ++ N KE+TEKI
Sbjct: 855 NELKLAKQKCSNLQEKINFGNKLAKEHTEKI 885
>SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box
associated subunit Sfc1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 569 MEVDERPTEQYSDIGGLDKQIQELIEAV 652
M V+ PT ++S +G K IQE+IEA+
Sbjct: 198 MGVESVPTCRHSKLGEPSKTIQEVIEAL 225
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 26.6 bits (56), Expect = 3.8
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 155 PTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIEL 334
P+ EI S+ DNE ++ + + IS+E +ND +E E N+ S+
Sbjct: 61 PSVEIRSKLVSPDNEANLLSDQNITISNENNNENDTTEE-AETSSGNEAADDEDSSSDAQ 119
Query: 335 LDVDPQEEEEDG-AVVDLDSQRK 400
V E DG + +LD +RK
Sbjct: 120 SSVPSFSEIHDGMSEEELDKERK 142
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = +2
Query: 596 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPXTGE 745
++ DI G+ + + + + + P+ + + + P G+LL+G P G+
Sbjct: 604 RWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGK 653
>SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 599
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 335 LDVDPQEEEEDGAVVDLDSQRKGKCAVIKTST 430
++VD +EEED V D D VI ST
Sbjct: 250 VEVDDDDEEEDEVVTDDDGTSNADSEVITAST 281
>SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting
complex subunit Apc4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 719
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 662 LATLQLQLIPVSVYPDLQYLSIVQLVSHLPPLPL---LWRH 549
L + L +P++ + Q S + +SHLP +PL LW H
Sbjct: 642 LCEICLADVPLTFFEHQQKNSYLDAISHLPFIPLNSCLWLH 682
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/61 (18%), Positives = 29/61 (47%)
Frame = +2
Query: 185 LLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 364
L+D IM++ R + ++ + I + + N ++PY+ ++++D + E
Sbjct: 932 LIDGHCPIMENGKRRPKYRIRLSGNPILGDGKSDNQNMSIPYIRGEYVQMIDANQDNYLE 991
Query: 365 D 367
+
Sbjct: 992 E 992
>SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/65 (21%), Positives = 34/65 (52%)
Frame = +2
Query: 194 NEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 373
N + + ++ + ++Q + I +EK++ + + S + E L+++ QEE+ +
Sbjct: 196 NGLSVKLPNILTMDEQIQRLKEAIA--SEKLQQEERSQIIKSLMEEELEINEQEEKIKHS 253
Query: 374 VVDLD 388
+DLD
Sbjct: 254 FIDLD 258
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,847,482
Number of Sequences: 5004
Number of extensions: 56610
Number of successful extensions: 233
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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