Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_E05
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   292   2e-79
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    31   0.67 
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U41025-2|AAM51507.2|  356|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U41025-1|AAM51508.1|  407|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  292 bits (716), Expect = 2e-79
 Identities = 136/226 (60%), Positives = 165/226 (73%)
 Frame = +3

Query: 75  GFVKVVKHKQYFKRYQVKFKXRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 254
           G VKV+K+K YFKRYQVK + RREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV 
Sbjct: 2   GLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVV 61

Query: 255 CQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXX 434
            Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG                   
Sbjct: 62  AQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKG 121

Query: 435 XXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 614
                  +YNVE  +     F+  LD+GLARTTTG+++F  MKG  DGG+NVPHS  RF 
Sbjct: 122 HEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFF 180

Query: 615 GYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYI 752
           G+D ESK++NAE HR  I G HVA+YM  L+++DED +KRQF K++
Sbjct: 181 GFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFL 226


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +3

Query: 462 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 638
           N EP++   G F C+L       TT+G+R  G      +  L    + ++FPG    +  
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127

Query: 639 F 641
           F
Sbjct: 128 F 128


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 306  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 193
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 306  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 193
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 201 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 320
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


>U41025-2|AAM51507.2|  356|Caenorhabditis elegans Hypothetical
           protein C01C4.3a protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 75  GFVKVVKHKQYFKRYQVKFKXRREGKTDYYARK 173
           GF+K+ +HKQ  +R  +KF  R + K   + R+
Sbjct: 25  GFIKLAEHKQSKQRIAIKFFPRPQTKQADFVRE 57


>U41025-1|AAM51508.1|  407|Caenorhabditis elegans Hypothetical
           protein C01C4.3b protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 75  GFVKVVKHKQYFKRYQVKFKXRREGKTDYYARK 173
           GF+K+ +HKQ  +R  +KF  R + K   + R+
Sbjct: 138 GFIKLAEHKQSKQRIAIKFFPRPQTKQADFVRE 170


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 348 SDQPSHHNVATHVNKQRTQYGHLQSESRP 262
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 348 SDQPSHHNVATHVNKQRTQYGHLQSESRP 262
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 348 SDQPSHHNVATHVNKQRTQYGHLQSESRP 262
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,949,273
Number of Sequences: 27780
Number of extensions: 352850
Number of successful extensions: 830
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)