Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_E04
(847 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 128 7e-31
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 42 1e-04
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 40 3e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 40 3e-04
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 40 6e-04
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 38 0.002
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 38 0.002
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 36 0.005
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 36 0.007
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 36 0.007
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 35 0.013
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 34 0.029
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 33 0.051
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 33 0.051
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 32 0.089
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 32 0.12
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 32 0.12
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 32 0.12
SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|ch... 31 0.21
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 31 0.21
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 31 0.21
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 31 0.27
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 31 0.27
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 30 0.36
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 28 1.9
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 27 3.3
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 27 3.3
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 27 4.4
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 4.4
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 27 4.4
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 27 4.4
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.8
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 26 5.8
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 26 7.7
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 7.7
SPBC4B4.06 |vps25||ESCRT II complex subunit Vps25|Schizosaccharo... 26 7.7
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 26 7.7
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 7.7
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 26 7.7
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 26 7.7
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 26 7.7
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 128 bits (310), Expect = 7e-31
Identities = 59/142 (41%), Positives = 89/142 (62%)
Frame = +3
Query: 390 LRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDNPINAVT 569
++K + R+TVDY + + K + R + + H +P+ +L PP Y N +++
Sbjct: 10 IQKPMTRRTVDYGSGLSKYIVNRHLRSNRYHIHVPRPNPNQIINLYPPYEYKYNNTSSLC 69
Query: 570 TRFVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSM 749
T+++ T+ NK R I V WTP+GRRL+TG+S+GEFTLWNGLTFNFE I Q+HD VR
Sbjct: 70 TKYIHTSANKARHVINVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAVRCA 129
Query: 750 VWSHGXGWMVTGXHSGFIKYWQ 815
WS W+++G G +KY++
Sbjct: 130 EWSTDGRWLISGDGGGMVKYFE 151
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 627 WTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGFIK 806
W+ +GR LI+G G + N I+QAH+ VR + +S VT G +K
Sbjct: 131 WSTDGRWLISGDGGGMVKYFEP-NLNNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLK 189
Query: 807 YW 812
W
Sbjct: 190 VW 191
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +3
Query: 621 VAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGF 800
+A++P+G+ L+TG + LW+ T + H+ + S+ +SH ++V+G
Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 801 IKYW 812
+ W
Sbjct: 426 ARLW 429
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 40.3 bits (90), Expect = 3e-04
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 621 VAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMV--TGXHS 794
V ++P+GR + +G SSG W+ T L AH PV+SM + V +
Sbjct: 492 VGFSPDGRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVD 551
Query: 795 GFIKYW 812
G IKYW
Sbjct: 552 GSIKYW 557
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 40.3 bits (90), Expect = 3e-04
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXH 791
+ V+ +P R + T +S G +W+ LTF E L H + + W+ G ++ +
Sbjct: 57 VTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASD 116
Query: 792 SGFIKYW 812
I+ W
Sbjct: 117 DKTIRIW 123
Score = 29.1 bits (62), Expect = 0.83
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXH 791
+ ++ + P G L++G+ +WN +L AH P+ S+ S T +
Sbjct: 141 VSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASY 200
Query: 792 SGFIKYW 812
G + W
Sbjct: 201 DGMARIW 207
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 717 LQAHDSPVRSMVWSHGXGWMVTGXHSGFIKYWQSI*IMLKC 839
L H+ V + S W+ T G IK W ++ L+C
Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLEC 90
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 39.5 bits (88), Expect = 6e-04
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 609 PIFAVAWT-PEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTG 785
P+ + W EG ++ AS+ +++N ++ + H +PV ++ +SH ++ TG
Sbjct: 434 PVNCIDWNLREGTPILAVASNSIVSMYNAISLQQLAVFMRHTAPVSALSFSHNGRYLATG 493
Query: 786 XHSGFIKYW 812
SG + W
Sbjct: 494 DTSGGVCIW 502
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 624 AWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGFI 803
+++P+GR + T + LW+G T F L+ H + V WS +V+ +
Sbjct: 396 SFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTL 455
Query: 804 KYW 812
K W
Sbjct: 456 KVW 458
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/82 (18%), Positives = 36/82 (43%)
Frame = +3
Query: 567 TTRFVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRS 746
T +F+ T + ++ AW+ + R L++ + +W+ + + L H+ V +
Sbjct: 420 TGKFLATLRGHVAA-VYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFA 478
Query: 747 MVWSHGXGWMVTGXHSGFIKYW 812
+ WS + +G ++ W
Sbjct: 479 VDWSPDGQRVASGGADKAVRIW 500
Score = 30.7 bits (66), Expect = 0.27
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 612 IFAVAWTPE-GRRLITGASSGEFT--LWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVT 782
I + ++P RL+TG SG+FT LW+ T ++ H + V + W+ + T
Sbjct: 137 IISAQFSPSTSSRLVTG--SGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIAT 194
Query: 783 GXHSGFIKYW 812
G I++W
Sbjct: 195 GSMDNTIRFW 204
Score = 30.3 bits (65), Expect = 0.36
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWN 689
+FAV W+P+G+R+ +G + +W+
Sbjct: 476 VFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 579 VKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFN-FETILQAHDSPVRSMVW 755
+K TN + C VAW P+ + TG+ W+ + L+ H P+ ++ W
Sbjct: 173 MKGHTNWVSC----VAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCW 228
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +3
Query: 519 DLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLT 698
+LL P S PD P TT AT+ + ++ G L +G +G +W+ T
Sbjct: 4 ELLDPFSIPDYPEALTTTLKHGHATS--------IRFSTNGYHLASGLVNGSVVIWDLST 55
Query: 699 FNFETILQAHDSPVRSMVWSHGXGWMVT 782
F+ +L H ++S+ WS +++T
Sbjct: 56 FSVSRVLTGHTRAIQSVCWSSCDRFLLT 83
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 36.3 bits (80), Expect = 0.005
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 621 VAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGF 800
V++ P L TG+S +W+ T + AH SPV ++ S + + SG
Sbjct: 493 VSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGI 552
Query: 801 IKYW 812
IK W
Sbjct: 553 IKVW 556
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +3
Query: 594 NKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGW 773
N P+ A+ + +G L + SG +W+ + N H S V S+ +S+
Sbjct: 526 NAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKI 585
Query: 774 MVTGXHSGFIKYW 812
+V+G + +W
Sbjct: 586 LVSGGADTDVNFW 598
Score = 29.1 bits (62), Expect = 0.83
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +3
Query: 609 PIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGX 788
P+F V+ +P+ +++ + G LW+ T + H++P+ + +S + T
Sbjct: 405 PVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATAS 464
Query: 789 HSGFIKYW 812
H + W
Sbjct: 465 HDQTARLW 472
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 35.9 bits (79), Expect = 0.007
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 621 VAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGF 800
+ ++P GR +++G +G+ L + T +L H SPVRS+ +S G + S
Sbjct: 151 IDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAFSPGSTLLAAAGDSKM 210
Query: 801 I 803
I
Sbjct: 211 I 211
Score = 29.9 bits (64), Expect = 0.47
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTG 785
IFAVA+ P G L++ G+ +W+ T + D + ++ W + G++V G
Sbjct: 232 IFAVAFNPVGDLLLSADVEGKIKIWDIDTMECISTQSETDGAIWAVAW-YKNGFIVAG 288
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3
Query: 609 PIFAVAWTPEGRRLITGASSGEFTLWNG--LTFNFETILQAHD-SPVRSMVWSHGXGWMV 779
PI ++ W G RL + +SSG +WN L F F T L V +VW +
Sbjct: 26 PIRSLGWNLSGSRLASSSSSGSVLVWNSDRLDFKFTTELGNRGYGLVEQLVWDPTHSDRL 85
Query: 780 TGXHSG-FIKYW 812
++G I++W
Sbjct: 86 MAVYAGKMIRFW 97
Score = 33.1 bits (72), Expect = 0.051
Identities = 13/63 (20%), Positives = 31/63 (49%)
Frame = +3
Query: 615 FAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHS 794
F + ++P+ R L G + +LW+ E + D P+R++ +S+ ++ +G
Sbjct: 198 FCIEFSPDNRHLAIGGADAITSLWDPQELICERSITRMDYPIRTLSFSYDSRYLASGSED 257
Query: 795 GFI 803
++
Sbjct: 258 RYV 260
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 717 LQAHDSPVRSMVWSHGXGWMVTGXHSGFIKYWQS 818
LQ P+RS+ W+ + + SG + W S
Sbjct: 20 LQGQQGPIRSLGWNLSGSRLASSSSSGSVLVWNS 53
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSM--VWSHGXGWMVTG 785
I A+AW+P G +L T ++ +W+ + + AH S V + + S ++ T
Sbjct: 352 IVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATS 411
Query: 786 XHSGFIKYWQSI 821
+ G +K W +
Sbjct: 412 GYDGCVKLWNPL 423
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXH 791
IF++A P+G + +G + +W+ + +L H + +M WS + T
Sbjct: 310 IFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSA 369
Query: 792 SGFIKYW 812
+K W
Sbjct: 370 DDTVKIW 376
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/65 (21%), Positives = 29/65 (44%)
Frame = +3
Query: 621 VAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGF 800
+ W+ + + +++ +WNG TF ++AH S V+ + + + T
Sbjct: 140 LCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITFDPAGKYFATESDDRT 199
Query: 801 IKYWQ 815
IK W+
Sbjct: 200 IKVWR 204
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 603 RCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFE 710
R IF++ P+G R+ TG G +W+ N E
Sbjct: 18 RLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINRE 53
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 33.1 bits (72), Expect = 0.051
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 594 NKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLT---FNFETILQAHDSPVRSMVWSHG 764
N+++C +AW+ G L T + +W F+ +LQ H V+ + W
Sbjct: 379 NEVKC----IAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPT 434
Query: 765 XGWMVTGXHSGFIKYWQ 815
+V+G + I +W+
Sbjct: 435 EDLLVSGSYDNSICFWR 451
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.1 bits (72), Expect = 0.051
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +3
Query: 618 AVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSG 797
+VA++P+G+ L TG + +W+ +L H+ + S+ +S +V+G
Sbjct: 339 SVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDR 398
Query: 798 FIKYW 812
+ W
Sbjct: 399 TVCLW 403
Score = 29.5 bits (63), Expect = 0.63
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXH 791
I +V +P+G+ +I+G+ W+ + + + LQ H++ V S+ S TG
Sbjct: 515 ILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSG 574
Query: 792 SGFIKYW 812
+ W
Sbjct: 575 DLRARIW 581
Score = 27.5 bits (58), Expect = 2.5
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLW 686
+++VA++P+G+ L++G+ LW
Sbjct: 461 VYSVAFSPDGKYLVSGSLDNTIKLW 485
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 32.3 bits (70), Expect = 0.089
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 627 WTPEGRRLITGASSGEFTLWN-GLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGFI 803
++ +G+R+ITGA G+ +W+ F T Q H S V + +S + + G +
Sbjct: 347 YSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQ-HTSAVSGLCFSKRGNVLFSSSLDGSV 405
Query: 804 KYWQSI 821
+ W I
Sbjct: 406 RAWDLI 411
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +3
Query: 651 ITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGFIKYW 812
I + G+ +W + ++ Q+H + ++ +S ++TG G IK W
Sbjct: 313 IGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVW 366
Score = 25.8 bits (54), Expect = 7.7
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWN 689
+ ++A+ P+G+ + + G+ T WN
Sbjct: 512 VLSLAFHPDGKEVCVASLDGQLTFWN 537
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWS 758
+ +V WT +G +L G SG +W+ + L+ H V ++ W+
Sbjct: 169 VTSVLWTGKGTQLAVGTDSGVIYIWDIESTKSVRSLKGHSERVAALAWN 217
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 621 VAWTPEGRRLIT--GASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHS 794
+AW+ ++T G + + +LW + L AH + V + S +VTG
Sbjct: 341 MAWSKTSNEIVTTHGFAKNQVSLWKYPSLKNIANLTAHTNRVLYLSMSPDGQSIVTGAGD 400
Query: 795 GFIKYWQ 815
+++W+
Sbjct: 401 ETLRFWK 407
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMV 779
I ++A P+G + G +GE + + N T H SPV+++ + W+V
Sbjct: 336 ITSLAVHPDGNLFVAGLENGELRFFETSSGNELTKFGPHSSPVKTLQFGENGYWLV 391
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLT-FNFETILQAHDSPVRSMVWSHGXGWMVTGX 788
I A+ W+ +G + TG + LW T F F T + D V + W ++ G
Sbjct: 107 IVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIV-WLSWHPKGLFLAAGC 165
Query: 789 HSGFIKYW 812
+ G I W
Sbjct: 166 NDGSIWMW 173
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 609 PIFAVAWTPEGRRLITGASSGEFTLWN 689
PI +A TP+G+R++TG+ E +++
Sbjct: 370 PILCMAITPDGKRVVTGSDDTELLVFD 396
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 621 VAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRS 746
++W P+G L G + G +W+ + ++ H +PV +
Sbjct: 152 LSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNA 193
>SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 31.1 bits (67), Expect = 0.21
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 762 HVTKPLILLVSHELGEWFQS*MLIHSIV 679
H LI ++ HELG W+ S LI++I+
Sbjct: 321 HTEPELIAILGHELGHWYMSHNLINTII 348
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 657 GASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGFIKYW 812
G ++G+ TLW+ + + H PVR + + +MVT +K W
Sbjct: 241 GHANGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVW 292
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +3
Query: 609 PIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGX 788
P+ AVA P+G + + S G LW+ T ++ H + S+ +S +V+G
Sbjct: 507 PVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGG 566
Query: 789 HSGFIKYW 812
++ W
Sbjct: 567 SDCTVRAW 574
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/68 (17%), Positives = 27/68 (39%)
Frame = +3
Query: 609 PIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGX 788
P++ ++P+ + L++ + LW+ T + H PV + + + T
Sbjct: 381 PVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATAS 440
Query: 789 HSGFIKYW 812
H + W
Sbjct: 441 HDQTAQLW 448
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/64 (21%), Positives = 25/64 (39%)
Frame = +3
Query: 621 VAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGF 800
V + P ++TG+S LW+ + + H PV ++ + M + G
Sbjct: 469 VTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGL 528
Query: 801 IKYW 812
I W
Sbjct: 529 IHLW 532
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 30.7 bits (66), Expect = 0.27
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXH 791
+ A+A T + ++LI S T++ + ++AH++PV +M + TG
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 792 SGFIKYW 812
G +K W
Sbjct: 124 EGLVKVW 130
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/55 (18%), Positives = 24/55 (43%)
Frame = +3
Query: 648 LITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGFIKYW 812
L +GA LW+ + + + H S +R + + ++++G ++ W
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 30.7 bits (66), Expect = 0.27
Identities = 15/69 (21%), Positives = 30/69 (43%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXH 791
++ V ++P R + + G+ +++G T + + AH + S+ WS VT
Sbjct: 192 VYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSA 251
Query: 792 SGFIKYWQS 818
K W +
Sbjct: 252 GYSCKIWDA 260
Score = 26.6 bits (56), Expect = 4.4
Identities = 7/29 (24%), Positives = 18/29 (62%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLT 698
IF+++W+P+ + +T ++ +W+ T
Sbjct: 234 IFSISWSPDSSQFVTSSAGYSCKIWDANT 262
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 30.3 bits (65), Expect = 0.36
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 9/67 (13%)
Frame = +3
Query: 612 IFAVAWTP--EGRRLITGASSGEF----TLWNGLTFN---FETILQAHDSPVRSMVWSHG 764
I +AW P E RL+ G +G +W+ T TI AHD V + W+H
Sbjct: 274 IGVLAWKPVLETNRLLVGKGNGNIFVYDIIWSESTSKAVLVATITNAHDEQVCGLTWNHD 333
Query: 765 XGWMVTG 785
+G
Sbjct: 334 GSQFASG 340
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/67 (17%), Positives = 29/67 (43%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXH 791
+ A ++ + +++ SGE +++ + + +QAHD + + H + T
Sbjct: 438 VLAASFINNDKCIVSAYKSGELEVYDIASSSLIERIQAHDGAIWDLAVGHDGTYFATASA 497
Query: 792 SGFIKYW 812
+K W
Sbjct: 498 DHTVKLW 504
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/68 (20%), Positives = 27/68 (39%)
Frame = +3
Query: 609 PIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGX 788
P+ +A+ P ++G + +WN + L H VR + H W+++
Sbjct: 55 PVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCS 114
Query: 789 HSGFIKYW 812
I+ W
Sbjct: 115 DDQTIRIW 122
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 3.3
Identities = 7/27 (25%), Positives = 17/27 (62%)
Frame = +3
Query: 609 PIFAVAWTPEGRRLITGASSGEFTLWN 689
P+ +++W+P G L+ + + T+W+
Sbjct: 102 PLSSISWSPSGELLLWSSFDSKITVWS 128
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDS 734
I++V + PE I+G+ +W+ T + +L+ HD+
Sbjct: 550 IYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDA 590
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 579 VKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWS 758
+KT K P+ AVA +G ++ G G +W+ + +L+ H + S+ S
Sbjct: 171 IKTIEEKY--PLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAIS 228
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +3
Query: 384 KRLRKSVMRKTVDYNAAIIKALECRV---WQRDWRDRHALQPDAMY-TPDLLPPPSYPDN 551
++LRKS+M+K+ D ++ + RV + R +L+ + + T D P +PDN
Sbjct: 123 RKLRKSLMKKSEDDEEQGVRGRKIRVMLPYLHSLRSPTSLKNFSRFDTHDSTNNPYFPDN 182
Query: 552 P 554
P
Sbjct: 183 P 183
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 609 PIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSH 761
P+ ++W G L++G G LW + + L S + S+ SH
Sbjct: 264 PLNGLSWALNGEYLLSGGQEGVLVLWQ-METSHRQFLPRLGSSILSIATSH 313
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 211 PKSMFYYLDTLS*FIYYNIVDCFFTAAQ 128
P+S+FY+ +L FI + D F+ +AQ
Sbjct: 123 PESIFYHFVSLQSFIRKYLTDVFYCSAQ 150
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 92 HNKILTIISKCVLCCCEETIDNVIVYKSR*GIQVIKHGFRTSSPE 226
H+ +L I+ V C +D +++ G V++ G RT PE
Sbjct: 415 HSHVLPIL---VACQTNHAVDQILIRLLHQGASVMRLGSRTKDPE 456
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +3
Query: 648 LITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHSGFIKYW 812
L +G+ LWN TF +L+ H S V + + +++G I+ W
Sbjct: 286 LASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIW 338
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 618 AVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTG 785
AV + P +I +G+ +WN T +D P+R+ + W V G
Sbjct: 19 AVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARKNWFVCG 74
Score = 25.8 bits (54), Expect = 7.7
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 621 VAWTPEGRR--LITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXHS 794
V + P G + LIT +W+ T IL+ H + V + +++G
Sbjct: 190 VNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSED 249
Query: 795 GFIKYWQSI 821
G +K W ++
Sbjct: 250 GTVKIWHTL 258
>SPBC4B4.06 |vps25||ESCRT II complex subunit
Vps25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 175
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 226 TWVCPRRAWV*WVHPWARHRGGTTFAITLDL 318
TW + AW W+ W R T+ I +L
Sbjct: 21 TWHSQKAAWQMWILLWCRENRQTSITINPEL 51
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/44 (20%), Positives = 20/44 (45%)
Frame = +3
Query: 555 INAVTTRFVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLW 686
++ +T FV ++ W+P+G+ L +G + +W
Sbjct: 267 VDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVW 310
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 288 RNNIRHNFRPFNYQMRFPPQGPLNMTQ 368
++NIR++ P Q P Q P+N TQ
Sbjct: 197 KDNIRNSATPSTSQADIPTQYPINSTQ 223
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 7.7
Identities = 16/67 (23%), Positives = 26/67 (38%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGXGWMVTGXH 791
++A+ P L+T +W+ T +L H S V S+ +VTG
Sbjct: 250 VYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSM 309
Query: 792 SGFIKYW 812
I+ W
Sbjct: 310 DSTIRLW 316
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/48 (18%), Positives = 24/48 (50%)
Frame = +3
Query: 612 IFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVW 755
+ +AW +G +L +G + +W+ + + H++ V+++ W
Sbjct: 307 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAW 354
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 627 WTPEGRRLITGASSGEFTLWN 689
W P+G +TG S G +W+
Sbjct: 554 WQPKGNLFVTGGSDGIVKVWD 574
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,599,102
Number of Sequences: 5004
Number of extensions: 76815
Number of successful extensions: 272
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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