Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_E03
         (507 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108...    31   0.70 
02_01_0412 - 3005600-3007759                                           29   1.6  
04_04_1580 - 34576595-34576723,34576905-34576981,34577058-345771...    29   2.8  
05_01_0268 - 2053420-2053539,2053636-2053710,2053805-2053867,205...    28   3.7  
04_04_1702 + 35475019-35475564,35476105-35476116,35476156-354762...    27   6.5  

>05_01_0160 +
           1081416-1081647,1081840-1082012,1082169-1082246,
           1082372-1082529,1082558-1082709,1083232-1083290,
           1083633-1083912,1084235-1084470,1084601-1084744,
           1084845-1085012
          Length = 559

 Score = 30.7 bits (66), Expect = 0.70
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 34  HDEVANRCVATRRCGDRGMRSHFRRHQRQ*ALVSTTMTCSTAR-KCSVRELKTSIS 198
           H++  +R V    CG + ++ +F+RHQR         +C T R +C +++ K S S
Sbjct: 405 HNKSCHRHVVCDVCGTKQLKKNFKRHQRM-----HEGSCVTERVRCHLKDCKLSFS 455


>02_01_0412 - 3005600-3007759
          Length = 719

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
 Frame = +3

Query: 111 PASIGPCVYHHDVQYSSKMFRKRVENLHFS-LPHVPSI--FGRSIQGILAFDKTYSTA-- 275
           P+S+G C Y   +  SS  F   + N++FS LP++ ++   G    G +  +  YS +  
Sbjct: 318 PSSLGECTYLVTINLSSNKFTGELANVNFSNLPNLKALDFSGNDFTGTIP-ESIYSCSNL 376

Query: 276 -----SANITQGGIGYNFVNLR 326
                SAN   G +  N  NL+
Sbjct: 377 TSLRLSANRLHGQLTKNIGNLK 398


>04_04_1580 -
           34576595-34576723,34576905-34576981,34577058-34577104,
           34577864-34577964,34578114-34578203,34578647-34578763,
           34578835-34578992,34579562-34579843,34580367-34580667
          Length = 433

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 126 PCVYHH-DVQYSSKMFRKRVENLHFSLPHVPSIF 224
           P  +HH  +Q S + F+ RV + + + PH+PS F
Sbjct: 88  PLQHHHRQLQISQENFQDRVPSNNVAAPHLPSNF 121


>05_01_0268 -
           2053420-2053539,2053636-2053710,2053805-2053867,
           2053977-2054093,2054332-2054436,2054559-2054768,
           2054858-2054983,2055061-2055114,2055198-2055278,
           2055419-2055526,2055579-2055719,2056396-2056629
          Length = 477

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 107 RRKCDRIPRSPQRRVATQRFATSSWQMALNNSSAG 3
           R+ C+RI      R   Q FAT+S +  L NS+AG
Sbjct: 437 RQLCERISSDMGARNTEQIFATASLEDDLQNSNAG 471


>04_04_1702 +
           35475019-35475564,35476105-35476116,35476156-35476245,
           35476347-35476528,35476904-35477024,35477076-35477159
          Length = 344

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 163 FELYCTSWW*TQGPIDAGADESVTAFHDHRS 71
           F++YC  W    GP DA  D +    ++  S
Sbjct: 181 FQIYCIKWLECHGPFDAVIDAANVGLYNRNS 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,189,147
Number of Sequences: 37544
Number of extensions: 256849
Number of successful extensions: 564
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)