Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D24
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.2  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   5.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   6.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 582 LAXI*ILSFFICWAWYY 632
           +  I I  FFICW  YY
Sbjct: 261 MTVIIIAVFFICWTPYY 277


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 597 ILSFFICWAWYY 632
           +++FFICWA ++
Sbjct: 266 VITFFICWAPFH 277


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 573 VIGLAXI*ILSFFICWAWYY 632
           VI +    +++FFICWA ++
Sbjct: 283 VIRMLVAVVVAFFICWAPFH 302


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 555 HQHYQWSYLAHGHRVPSHQGQHG 487
           HQH+   Y  H HR  S   QHG
Sbjct: 319 HQHHPSQY--HPHRGSSPHHQHG 339


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 573 VIGLAXI*ILSFFICWAWYY 632
           VI +    ++ FFICWA ++
Sbjct: 268 VIKMLSAVVILFFICWAPFH 287


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 120 YNITMPAKAVCVLRGDVSGTVFFDQQD 200
           YN+ +P K++   + DV+     D  D
Sbjct: 104 YNVAVPTKSILEKKPDVTTVELVDATD 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,128
Number of Sequences: 438
Number of extensions: 4423
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)