Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D22
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.54 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.0  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -3

Query: 270 LSEVRFVRVWFS--RFYFFIFLNNSIGLVCRSICFL 169
           L ++ F R  FS  RFY   F N  +GLV   + FL
Sbjct: 247 LKKIEFCRPTFSAARFYGIDFSNTFLGLVGAVVTFL 282


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 630 PPVRPFGDRDDRYGQHHPNEHQHD 559
           PP  P  D D    Q++P   QH+
Sbjct: 214 PPPPPEEDDDSNIPQNNPKNKQHN 237


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
 Frame = +1

Query: 496 AEAVDDLICSFDYMDTAMDNL--VMLV----FIWMVLSIAIIAIAKWAY 624
           A   D +IC     D AM  L    LV    FIW+VLS  + A A  A+
Sbjct: 465 ANFYDAMICVAYKFDAAMMALRTSFLVNDFGFIWLVLSSTVRAYASRAF 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,172
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)