Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D22
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo...    29   5.2  
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo...    29   5.2  
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo...    29   5.2  
Z77663-4|CAB01213.1|  605|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   6.8  
AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical...    28   6.8  
AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical...    28   6.8  
AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical...    28   6.8  

>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
            metabolism enzyme-5 protein.
          Length = 2238

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 607  IAKWAYGRFAKKTTDADKPKIDETKKTTNEIVSSAD 714
            +AKW   +  KKT++A KP    T  +TN +VS  D
Sbjct: 1722 LAKWVEEKDKKKTSEAPKPHKSST-YSTNGLVSFCD 1756


>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
            metabolism enzymeprotein 5, isoform a protein.
          Length = 2276

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 607  IAKWAYGRFAKKTTDADKPKIDETKKTTNEIVSSAD 714
            +AKW   +  KKT++A KP    T  +TN +VS  D
Sbjct: 1760 LAKWVEEKDKKKTSEAPKPHKSST-YSTNGLVSFCD 1794


>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
            metabolism enzymeprotein 5, isoform b protein.
          Length = 2238

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 607  IAKWAYGRFAKKTTDADKPKIDETKKTTNEIVSSAD 714
            +AKW   +  KKT++A KP    T  +TN +VS  D
Sbjct: 1722 LAKWVEEKDKKKTSEAPKPHKSST-YSTNGLVSFCD 1756


>Z77663-4|CAB01213.1|  605|Caenorhabditis elegans Hypothetical
           protein F53F4.4 protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
 Frame = +1

Query: 634 AKKTTDADKPKIDETKKTTNEI--------VSSADSVLATSAKVKSASFKPTKATGFV 783
           AK TTD  KP+++   KT+  +        VS  + V+AT+   K    K  + T  V
Sbjct: 158 AKVTTDGSKPEVNMLVKTSLNVDDKNTTLGVSKEEEVIATTESTKEKKLKSGEVTSHV 215


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 516 HLQFRLHGHSYGQPGHVGVHLDGAVHSDHRDRQMG 620
           H     HGH +  P H G H +  VH  H     G
Sbjct: 587 HGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYG 621


>AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5c protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 630 PPVRPFGDRDDRYGQHHPNEHQHD 559
           PP R FGDR +R  +HH      D
Sbjct: 307 PPRRSFGDRGNRSDEHHGGSRHMD 330


>AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5b protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 630 PPVRPFGDRDDRYGQHHPNEHQHD 559
           PP R FGDR +R  +HH      D
Sbjct: 442 PPRRSFGDRGNRSDEHHGGSRHMD 465


>AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5a protein.
          Length = 571

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 630 PPVRPFGDRDDRYGQHHPNEHQHD 559
           PP R FGDR +R  +HH      D
Sbjct: 487 PPRRSFGDRGNRSDEHHGGSRHMD 510


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,328,296
Number of Sequences: 27780
Number of extensions: 299962
Number of successful extensions: 1015
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)