BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_D16
(694 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071004-1|AAL48626.1| 109|Drosophila melanogaster RE09053p pro... 94 1e-19
AE014134-3007|AAF53732.1| 109|Drosophila melanogaster CG15168-P... 94 1e-19
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 1.5
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 1.5
AE014298-1069|AAF46280.1| 1767|Drosophila melanogaster CG15327-P... 30 3.4
>AY071004-1|AAL48626.1| 109|Drosophila melanogaster RE09053p
protein.
Length = 109
Score = 94.3 bits (224), Expect = 1e-19
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +1
Query: 250 RSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNL 429
R+YLR+T QE+ +LPLDI++Q V+SL V++ ++ + GN +EI A ++ W+T N
Sbjct: 29 RTYLRLTEQEWNSLPLDIILQTVISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNF 88
Query: 430 PSFYIFNHRGKALSYDYVP 486
PSFY FNHRG+AL+ Y P
Sbjct: 89 PSFYSFNHRGRALNPGYTP 107
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 104 FHKVIVIIGFLSLFHTAFSATQRKCDLNV 190
F+K+++I GF SL H AFSA + L +
Sbjct: 6 FNKLLLIAGFASLAHAAFSAAHHRTYLRL 34
>AE014134-3007|AAF53732.1| 109|Drosophila melanogaster CG15168-PA
protein.
Length = 109
Score = 94.3 bits (224), Expect = 1e-19
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +1
Query: 250 RSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNL 429
R+YLR+T QE+ +LPLDI++Q V+SL V++ ++ + GN +EI A ++ W+T N
Sbjct: 29 RTYLRLTEQEWNSLPLDIILQTVISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNF 88
Query: 430 PSFYIFNHRGKALSYDYVP 486
PSFY FNHRG+AL+ Y P
Sbjct: 89 PSFYSFNHRGRALNPGYTP 107
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 104 FHKVIVIIGFLSLFHTAFSATQRKCDLNV 190
F+K+++I GF SL H AFSA + L +
Sbjct: 6 FNKLLLIAGFASLAHAAFSAAHHRTYLRL 34
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3
Query: 204 FLVNSANINLCLPSRS 251
FLVN+AN+N+C P+RS
Sbjct: 496 FLVNTANLNICFPTRS 511
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3
Query: 204 FLVNSANINLCLPSRS 251
FLVN+AN+N+C P+RS
Sbjct: 462 FLVNTANLNICFPTRS 477
>AE014298-1069|AAF46280.1| 1767|Drosophila melanogaster CG15327-PA
protein.
Length = 1767
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 424 NLPSFYIFNHRGKALSYDYVPTPTKAD 504
N+ SF IF H + L++D +PT T D
Sbjct: 1678 NMRSFGIFQHHSQILAWDNLPTTTDTD 1704
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,207,350
Number of Sequences: 53049
Number of extensions: 507665
Number of successful extensions: 1209
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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