Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D16
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66519-5|CAA91382.2|  500|Caenorhabditis elegans Hypothetical pr...    41   0.001
Z99288-10|CAB16552.2|  338|Caenorhabditis elegans Hypothetical p...    28   7.3  

>Z66519-5|CAA91382.2|  500|Caenorhabditis elegans Hypothetical
           protein B0334.5 protein.
          Length = 500

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +1

Query: 232 YVCLLDRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWG 345
           Y     R YLR+T Q F  LP D+V Q V+SL A+++G
Sbjct: 22  YSAAQHRFYLRLTEQPFINLPSDVVAQTVISLIALIYG 59


>Z99288-10|CAB16552.2|  338|Caenorhabditis elegans Hypothetical
           protein ZK262.11 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 21  IAVFVNNLLQFAFYSF*VVIXVYITWLHFIKL 116
           IA F   LLQ++ YSF + I V I  L F+ L
Sbjct: 82  IAGFSLGLLQYSSYSFLLAIFVMIACLQFVTL 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,832,564
Number of Sequences: 27780
Number of extensions: 271796
Number of successful extensions: 685
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)