Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D16
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   1.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.6  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   4.8  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   4.8  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   4.8  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 289 LPLDIVIQAVVSLFAVMWGVL 351
           LPL   + A++ LF + WG L
Sbjct: 216 LPLGCPVNAIMGLFVLWWGWL 236


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 397 NAIKWETQNNLPSFYIFNH 453
           N IK   QNN+P++ + NH
Sbjct: 342 NWIKGTPQNNVPNWVMGNH 360


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +3

Query: 234 CLPSRSIIFEDHVTRVYHVTIGYC 305
           CL   S+ F+ H+T  +      C
Sbjct: 55  CLTPDSVFFKSHITEAFQTQCKKC 78


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +3

Query: 234 CLPSRSIIFEDHVTRVYHVTIGYC 305
           CL   S+ F+ H+T  +      C
Sbjct: 55  CLTPDSVFFKSHITEAFQTQCKKC 78


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 122 IIGFLSLFHTAFSATQRKCD 181
           +  FLS   TA + T RKCD
Sbjct: 236 VSNFLSSTRTAETGTIRKCD 255


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,523
Number of Sequences: 438
Number of extensions: 3636
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)