Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D15
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   3.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.5  
AY994091-1|AAX86004.1|   83|Anopheles gambiae hyp6.3 precursor p...    23   7.2  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 548 KCGDCMKRLDSTNCCEGSDKDIYCKVC 628
           +C  C++R  +T  C G D+   C  C
Sbjct: 290 RCFRCLERGHTTADCAGEDRSSLCLHC 316


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 458  PGEGCPRCGGYVYAAEQMLARGRAWHK 538
            P   CPRC G V +   +L +   +H+
Sbjct: 946  PSAECPRCPGSVESVAHVLFQCEVFHE 972


>AY994091-1|AAX86004.1|   83|Anopheles gambiae hyp6.3 precursor
           protein.
          Length = 83

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +1

Query: 175 RRXGARGWWPQMAQNVLQMWSV 240
           ++ G RG+WP M ++V ++ ++
Sbjct: 55  QKMGGRGFWPIMMKSVKKIMAI 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,624
Number of Sequences: 2352
Number of extensions: 12822
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)