Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_D12
(767 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SZ89 Cluster: RE13149p; n=8; Bilateria|Rep: RE13149p ... 232 8e-60
UniRef50_UPI00015B525F Cluster: PREDICTED: similar to ENSANGP000... 195 1e-48
UniRef50_Q13889 Cluster: TFIIH basal transcription factor comple... 149 7e-35
UniRef50_O74366 Cluster: RNA polymerase II transcription factor ... 98 2e-19
UniRef50_A7SG25 Cluster: Predicted protein; n=1; Nematostella ve... 79 3e-18
UniRef50_UPI00005A4869 Cluster: PREDICTED: similar to general tr... 59 5e-16
UniRef50_Q12004 Cluster: RNA polymerase II transcription factor ... 82 2e-14
UniRef50_A4RQX7 Cluster: Predicted protein; n=1; Ostreococcus lu... 79 9e-14
UniRef50_Q552R3 Cluster: General transcription factor IIH, polyp... 79 1e-13
UniRef50_A7NVC0 Cluster: Chromosome chr18 scaffold_1, whole geno... 71 2e-11
UniRef50_Q0UMQ4 Cluster: Putative uncharacterized protein; n=3; ... 70 7e-11
UniRef50_Q01GM2 Cluster: Basal transcription factor complex subu... 68 2e-10
UniRef50_Q6CD24 Cluster: RNA polymerase II transcription factor ... 66 7e-10
UniRef50_Q4WVC2 Cluster: Transcription factor TFIIH subunit Tfb4... 66 1e-09
UniRef50_UPI000023F12B Cluster: hypothetical protein FG10862.1; ... 61 3e-08
UniRef50_Q6BL86 Cluster: RNA polymerase II transcription factor ... 60 8e-08
UniRef50_A5DKJ5 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_A5E525 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_A4R4C6 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06
UniRef50_Q6WGK3 Cluster: ZK1128.4; n=1; Pristionchus pacificus|R... 52 2e-05
UniRef50_Q3KZ74 Cluster: SJCHGC03528 protein; n=1; Schistosoma j... 52 2e-05
UniRef50_Q9P5Y6 Cluster: Related to basic transcription factor 2... 52 2e-05
UniRef50_Q4PG41 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_Q09645 Cluster: Putative uncharacterized protein; n=2; ... 48 3e-04
UniRef50_Q4X5C5 Cluster: Putative uncharacterized protein; n=7; ... 46 8e-04
UniRef50_A6QTZ0 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_A7API8 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q2GPB6 Cluster: Putative uncharacterized protein; n=1; ... 43 0.007
UniRef50_A2EYI3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.029
UniRef50_Q7YZ09 Cluster: Transcription factor, possible; n=3; Cr... 38 0.27
UniRef50_A2X0D6 Cluster: Putative uncharacterized protein; n=2; ... 37 0.48
UniRef50_UPI00006CF9B9 Cluster: hypothetical protein TTHERM_0042... 37 0.63
UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: L... 36 1.5
UniRef50_A6EGU1 Cluster: Cysteine desulfurase; n=1; Pedobacter s... 34 3.4
UniRef50_A7B3K6 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_Q6A8U9 Cluster: Conserved protein; n=1; Propionibacteri... 33 7.8
UniRef50_Q09EC3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q4U8M4 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
>UniRef50_Q8SZ89 Cluster: RE13149p; n=8; Bilateria|Rep: RE13149p -
Drosophila melanogaster (Fruit fly)
Length = 299
Score = 232 bits (567), Expect = 8e-60
Identities = 103/202 (50%), Positives = 146/202 (72%)
Frame = +2
Query: 158 TNPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLD 337
TNP+ ++ ++P+ LT +L+AV+AF N+HLMQKA N+LAV+ C H + +LYP P + ++
Sbjct: 24 TNPSQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLAVVSCSHHATNFLYPLPRRQVE 83
Query: 338 VRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRRSAIP 517
+RQ+DGQYE F LVEKT+K +L +++ + P+ P ES C+I+R +R+ P
Sbjct: 84 LRQVDGQYEAFNLVEKTVKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQRNLAP 143
Query: 518 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGL 697
G++ SRILVVTGS + A+QY+ ++NVFFTAQK + ID C++DK LSLLQQGCDIT G
Sbjct: 144 GVKMHSRILVVTGSNECASQYMTFLNVFFTAQKLGITIDTCALDKTLSLLQQGCDITSGQ 203
Query: 698 YLKIPSLEGLLQYLLWVSCRKP 763
+LK+ L+GLLQYLLWV P
Sbjct: 204 FLKVTQLDGLLQYLLWVFLPAP 225
>UniRef50_UPI00015B525F Cluster: PREDICTED: similar to
ENSANGP00000011127; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000011127 - Nasonia
vitripennis
Length = 296
Score = 195 bits (475), Expect = 1e-48
Identities = 96/197 (48%), Positives = 125/197 (63%), Gaps = 7/197 (3%)
Frame = +2
Query: 194 KMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLDVRQIDGQYELFT 373
++LT LD+ + FSN+HLMQ A N LA++ CH +++LYP P DVRQ DGQYE FT
Sbjct: 26 QVLTQCLDSTIVFSNAHLMQTAGNSLAIMACHSQGAQFLYPQEKMP-DVRQFDGQYEKFT 84
Query: 374 LVEKTIKMRLVNLIKSQPQEEKPGE-SXXXXXXXXXXCFIARSRRSAIPGLRTSSRILVV 550
+E+T++ ++ ++ + K E S C+IAR R G RILV+
Sbjct: 85 QLERTVRQQIHEMVGEMSMDRKGNEESLISGALSMALCYIARMEREKYAGEHLHPRILVI 144
Query: 551 TGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPS----- 715
T S D+A QY+NYMN+FFTAQK V++DVCS+D L+LLQQGCD+TGG YLKIP
Sbjct: 145 TASHDSATQYMNYMNIFFTAQKMGVMLDVCSLDHELTLLQQGCDLTGGNYLKIPQQSGQP 204
Query: 716 -LEGLLQYLLWVSCRKP 763
L GLLQYLLWV P
Sbjct: 205 PLAGLLQYLLWVFLPDP 221
>UniRef50_Q13889 Cluster: TFIIH basal transcription factor complex
p34 subunit; n=29; Deuterostomia|Rep: TFIIH basal
transcription factor complex p34 subunit - Homo sapiens
(Human)
Length = 308
Score = 149 bits (361), Expect = 7e-35
Identities = 79/197 (40%), Positives = 106/197 (53%), Gaps = 14/197 (7%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPS-----------PGKPLDVRQ 346
L+ +DAV+ NSHL SN+LAVI H +S +LYP PG P +
Sbjct: 34 LSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNP 93
Query: 347 I---DGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRRSAIP 517
DG+YEL T + I + +L+ + + E+ C+I R +
Sbjct: 94 SGSKDGKYELLTSANEVIVEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKD 153
Query: 518 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGL 697
SRILV+ + D+A QY+N+MNV F AQK+ +LID C +D LLQQ CDITGGL
Sbjct: 154 NQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGL 213
Query: 698 YLKIPSLEGLLQYLLWV 748
YLK+P + LLQYLLWV
Sbjct: 214 YLKVPQMPSLLQYLLWV 230
>UniRef50_O74366 Cluster: RNA polymerase II transcription factor B
subunit 4; n=1; Schizosaccharomyces pombe|Rep: RNA
polymerase II transcription factor B subunit 4 -
Schizosaccharomyces pombe (Fission yeast)
Length = 297
Score = 98.3 bits (234), Expect = 2e-19
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Frame = +2
Query: 161 NPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLDV 340
NP Y + ++ VL + F N+HL N +AV+ H K EYLYPS V
Sbjct: 33 NPASWYSLSKKVPVSKVLADITVFLNAHLAFHHDNRVAVLASHSDKVEYLYPSIAPEQKV 92
Query: 341 RQID-----GQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRR 505
++D Y F V+ + + L+ S + + ++ +I + +
Sbjct: 93 AEVDPTKEANTYRKFREVDDLVLSGMKRLMSSTDKVSR--KTMISGALSRALAYINQVQN 150
Query: 506 SAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDI 685
LR SRIL+ + + D A QYI MN F AQK+ + I+VC+++ L+Q D
Sbjct: 151 KNT--LR--SRILIFSLTGDVALQYIPTMNCIFCAQKKNIPINVCNIEGGTLFLEQAADA 206
Query: 686 TGGLYLKIPSLEGLLQYLL 742
TGG+YLK+ + +GLLQYL+
Sbjct: 207 TGGIYLKVDNPKGLLQYLM 225
>UniRef50_A7SG25 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 190
Score = 78.6 bits (185), Expect(2) = 3e-18
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +2
Query: 518 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGL 697
G + RIL++ S D A+ Y+ MN F AQK ID C + +H LQQ DITGG+
Sbjct: 116 GAKLQPRILIIKASPDDASHYMPVMNSIFAAQKSNTCIDACVLYEHSGYLQQATDITGGV 175
Query: 698 YLKIPSLEGLLQYLL 742
YLKIP + LLQYL+
Sbjct: 176 YLKIPETQALLQYLM 190
Score = 36.3 bits (80), Expect(2) = 3e-18
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKP--LDVRQIDGQYELFT 373
LT L++++ NS+L+ K +N LA + + S++LYP + D +YE F+
Sbjct: 35 LTRCLESLMVLCNSYLLLKHNNLLAFVAASTNGSKFLYPKASCEGIQSLPSQDSKYEKFS 94
Query: 374 LVEKTIKMRLVNLI 415
T+ + L+
Sbjct: 95 EFNDTVLREIKKLV 108
>UniRef50_UPI00005A4869 Cluster: PREDICTED: similar to general
transcription factor IIH, polypeptide 3, 34kDa isoform
3; n=3; Eutheria|Rep: PREDICTED: similar to general
transcription factor IIH, polypeptide 3, 34kDa isoform 3
- Canis familiaris
Length = 265
Score = 58.8 bits (136), Expect(2) = 5e-16
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYP-----------SPGKPLDVR- 343
L+ +DAV+ NSHL SN+LAVI H +S +LYP PG P +
Sbjct: 34 LSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGKLGDFFGDPGNPSEFSP 93
Query: 344 --QIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRRSAIP 517
DG+YELFT + I + +L+ + + E+ C+I R +
Sbjct: 94 SGSKDGKYELFTAANEVIVEEIKDLMIKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKD 153
Query: 518 GLRTSSRILV--VTG 556
SRIL +TG
Sbjct: 154 NQEMKSRILACDITG 168
Score = 48.4 bits (110), Expect(2) = 5e-16
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 677 CDITGGLYLKIPSLEGLLQYLLWV 748
CDITGGLYLK+P + LLQYLLWV
Sbjct: 164 CDITGGLYLKVPQMPSLLQYLLWV 187
>UniRef50_Q12004 Cluster: RNA polymerase II transcription factor B
subunit 4; n=5; Saccharomycetales|Rep: RNA polymerase II
transcription factor B subunit 4 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 338
Score = 81.8 bits (193), Expect = 2e-14
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 21/201 (10%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPL-----------DVRQ 346
+ VL+A++ F N+HL ++N++AVI + +YLYP L D++
Sbjct: 50 IIKVLEALIVFLNAHLAFNSANKVAVIAAYSQGIKYLYPESTSALKASESENKTRSDLKI 109
Query: 347 IDG-QYELFTLVEKTIKMRLVNLIKSQPQ--EEKPGESXXXXXXXXXXCFIAR-SRRSAI 514
I+ Y F V++T+ + L + + + E+ S ++ R S+ S
Sbjct: 110 INSDMYRRFRNVDETLVEEIYKLFELEKKQIEQNSQRSTLAGAMSAGLTYVNRISKESVT 169
Query: 515 PGLRTSSRILVVT----GSADTAAQYINYMNVFFTAQKEQVLIDVCSV--DKHLSLLQQG 676
L+ SR+LV+T S D QYI MN F+A K + IDV + K + LQQ
Sbjct: 170 TSLK--SRLLVLTCGSGSSKDEIFQYIPIMNCIFSATKMKCPIDVVKIGGSKESTFLQQT 227
Query: 677 CDITGGLYLKIPSLEGLLQYL 739
D T G+YL + S EGL+QYL
Sbjct: 228 TDATNGVYLHVESTEGLIQYL 248
>UniRef50_A4RQX7 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 285
Score = 79.4 bits (187), Expect = 9e-14
Identities = 60/183 (32%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLDVRQIDGQYELFTLV 379
L++VL+A F NS N AVI H YLY SP L++ D
Sbjct: 42 LSSVLEATTVFLNSFFALNQQNRAAVIAVHDDGCHYLYTSP---LELNAGDAS------A 92
Query: 380 EKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRR-SAIPGLRTSSRILVVTG 556
T K R + P S C+ R++ GLR RIL +
Sbjct: 93 SATGKKRTKT---ATPSSRAAMSSPFAGALSLALCYCNRAQTLETAAGLRVRPRILCLQA 149
Query: 557 SADTAAQYINYMNVFFTAQKEQVLIDVCSVDKH-LSLLQQGCDITGGLYLKIPSLEGLLQ 733
S D YI+ MN F+AQ++ + ID ++ +H L LQQ IT G Y+K GLLQ
Sbjct: 150 SQDNPTDYISMMNAIFSAQRQSIPIDAFALGEHDLPFLQQAAHITRGAYVKPTHGAGLLQ 209
Query: 734 YLL 742
YLL
Sbjct: 210 YLL 212
>UniRef50_Q552R3 Cluster: General transcription factor IIH,
polypeptide 3; n=2; Dictyostelium discoideum|Rep:
General transcription factor IIH, polypeptide 3 -
Dictyostelium discoideum AX4
Length = 372
Score = 79.0 bits (186), Expect = 1e-13
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Frame = +2
Query: 212 LDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPG--------KPLDVRQIDGQYEL 367
L+ + F N++LM N+LA+I +S +++P + L+ RQ++ EL
Sbjct: 96 LEHFMVFINAYLMLNQENQLAIICSKIGESSFVFPQSNIDQYQQEQQELEQRQLNENGEL 155
Query: 368 FTLVEKTIKMRLVNLIKSQPQEEKPGE-----SXXXXXXXXXXCFIARSRRSAIPGLRTS 532
KTI+ +++ ++ E K + S C+I R +R P ++
Sbjct: 156 LPTPNKTIQGQILAKLQKLDLEIKHDQTDILSSSFSASMSIALCYINRIKRET-PTIKP- 213
Query: 533 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLS-LLQQGCDITGGLYLKI 709
RILV S D ++QYI+ MN F++QK+ + +D C + + S LQQ +T G+YLK
Sbjct: 214 -RILVFNISPDVSSQYISVMNCIFSSQKQSIPVDSCILSQSDSTFLQQASHLTSGIYLKP 272
Query: 710 PSLEGLLQYLL 742
E L QYLL
Sbjct: 273 QKQELLSQYLL 283
>UniRef50_A7NVC0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=3; Magnoliophyta|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 211
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +2
Query: 443 GESXXXXXXXXXXCFIARSRRSAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQ 622
G S C+I R R+ L RIL + GS D QY+ MN F+AQ+
Sbjct: 32 GSSLLSGSLSMALCYIQRVFRTG--PLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSM 89
Query: 623 VLIDVCSVD-KHLSLLQQGCDITGGLYLKIPSLEGLLQYL 739
V ID C + +H + LQQ ITGG+YLK L+GL QYL
Sbjct: 90 VPIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYL 129
>UniRef50_Q0UMQ4 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 422
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = +2
Query: 530 SSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKI 709
+SRIL+V+ S D A QYI MN F AQ++++ ID+ + LLQQ D TGG+Y+K
Sbjct: 198 TSRILIVSVSGDLANQYIPVMNSIFAAQRKKIPIDILKLAGDTVLLQQASDATGGVYMKP 257
Query: 710 PSLEGLLQYLL 742
EGLLQYL+
Sbjct: 258 ERPEGLLQYLM 268
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 158 TNPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKP 331
TNP+ + L+ L ++ F N+HL +NE+ VI H HK+ +LYP+P P
Sbjct: 28 TNPHAWAHLSSSISLSAALANILVFINAHLASGNANEVCVIASHSHKATFLYPTPNPP 85
>UniRef50_Q01GM2 Cluster: Basal transcription factor complex
subunit-related; n=1; Ostreococcus tauri|Rep: Basal
transcription factor complex subunit-related -
Ostreococcus tauri
Length = 319
Score = 68.1 bits (159), Expect = 2e-10
Identities = 59/208 (28%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSP-GKPLD-----------VR 343
L++VL A + F N+ N V+ H YLY SP G D
Sbjct: 43 LSSVLGATITFLNAFFALNQQNRAVVVAVHGDGCHYLYTSPLGVETDEDGDEAEDARWAN 102
Query: 344 QIDGQYELFTLVEKTIKMRLVNLIKSQP-------------QEEKPGESXXXXXXXXXXC 484
++ G L + TI RL L ++ ++ P S C
Sbjct: 103 KVGGLDPLQSEAGPTILRRLGELNAAETGSSATGAKRDKADSDDGPATSPFAGALSLALC 162
Query: 485 FIARSRR-SAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLS 661
+ R++ GLR+ RIL + S D YI MN F+AQ++ + +D ++ +H S
Sbjct: 163 YCNRAQALENAAGLRSKPRILCLQASQDNPTDYIPMMNAIFSAQRQSIPVDAFALGEHDS 222
Query: 662 -LLQQGCDITGGLYLKIPSLEGLLQYLL 742
+QQ IT G Y+K +GLLQYLL
Sbjct: 223 PFMQQAAHITRGAYVKPTLGDGLLQYLL 250
>UniRef50_Q6CD24 Cluster: RNA polymerase II transcription factor B
subunit 4; n=1; Yarrowia lipolytica|Rep: RNA polymerase
II transcription factor B subunit 4 - Yarrowia
lipolytica (Candida lipolytica)
Length = 340
Score = 66.5 bits (155), Expect = 7e-10
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 30/211 (14%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYP--------------------S 319
++ + +++ F N+HL SN + VIG + + LYP S
Sbjct: 46 ISEAVASILVFINAHLALHNSNSVNVIGYNASGARILYPPKSGVESTRSKEREERSESVS 105
Query: 320 PGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIK--SQPQEEKPGESXXXXXXXXXXCFIA 493
G+ ++ Y F V++ ++ L N++ + +EEK S FI
Sbjct: 106 DGEQAPSKKDHSMYRQFKTVDEVVQTELWNMLNHTNYVEEEKQHNSAISGALSLALGFI- 164
Query: 494 RSRRSAIPGLRTSSRILVVT-GSADTAAQYINYMNVFFTAQKEQVLIDVCSV--DKHLSL 664
++ + R +RIL++T G + QYI MN F AQK ++ +DVC +
Sbjct: 165 -NKHVFVDESRMRARILLLTVGHKNETIQYIPTMNCIFAAQKLKIPVDVCKLGPGSDQVF 223
Query: 665 LQQGCDITGGLYLKI-----PSLEGLLQYLL 742
LQQ CD T G+Y+ I + +GL+QYLL
Sbjct: 224 LQQACDSTHGIYMDISEKNSKTPKGLVQYLL 254
>UniRef50_Q4WVC2 Cluster: Transcription factor TFIIH subunit Tfb4,
putative; n=8; Eurotiomycetidae|Rep: Transcription
factor TFIIH subunit Tfb4, putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 387
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = +2
Query: 518 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGL 697
GL++ I+ V+GS D+A QYI MN F Q+ + IDVC + LQQ D T G+
Sbjct: 208 GLQSRILIISVSGSTDSAHQYIPIMNCIFACQRLHIPIDVCKLSGDAVFLQQASDATKGV 267
Query: 698 YLKIPSLEGLLQYLL 742
Y+ + GLLQYL+
Sbjct: 268 YMSLSEPRGLLQYLM 282
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 158 TNPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGK 328
TNP+ ++ED L+ + ++ F N+HL +NE+AV+ H K+ +LYP K
Sbjct: 28 TNPHAWALLEDSLPLSTAIANILVFVNAHLACNYANEVAVVASHSQKATWLYPCETK 84
>UniRef50_UPI000023F12B Cluster: hypothetical protein FG10862.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10862.1 - Gibberella zeae PH-1
Length = 355
Score = 61.3 bits (142), Expect = 3e-08
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 30/226 (13%)
Frame = +2
Query: 158 TNPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLY---PSPGK 328
TNP + L+ + ++ F N+HL +N +A+I H ++E+LY P P +
Sbjct: 28 TNPRAWASLNSLLPLSRAIANILVFVNAHLAFSNANRVALIAAHVDRAEWLYPTPPKPSR 87
Query: 329 PL--DVRQIDG--------QYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXX 478
DV D ++ F +E + + L+ + + +
Sbjct: 88 DASGDVEMNDASQTQTSANKFPEFAQIETAVLSGIRKLMDQTKEADLSATTTQISGALTL 147
Query: 479 X-CFIARSRR---SAIPGLRTS-------------SRILVVTGSADTAAQYINYMNVFFT 607
C I ++ + S L S RILV++ S +QYI MN F
Sbjct: 148 ALCHINKAAQALCSPTANLEDSHKGSSSTSPPTVRGRILVISVSDSEPSQYIPTMNAVFA 207
Query: 608 AQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLW 745
A QV ID S+ + L+Q C TGG YL +GLL YL++
Sbjct: 208 AAHTQVAIDTLSLTGEPTFLEQACYNTGGTYLAATHPQGLLNYLMF 253
>UniRef50_Q6BL86 Cluster: RNA polymerase II transcription factor B
subunit 4; n=3; Saccharomycetales|Rep: RNA polymerase II
transcription factor B subunit 4 - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 387
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 533 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSV-DKHLSLLQQGCDITGGLYLKI 709
SRIL+V+ + D +YI MN F AQK +V IDV + ++ S LQQ D T G+YL I
Sbjct: 217 SRILIVSSNDDNDIKYIPIMNTTFAAQKMKVPIDVAKLGERDSSYLQQASDATNGVYLHI 276
Query: 710 PSLEGLLQYL 739
+ EGL+Q L
Sbjct: 277 ANPEGLIQTL 286
Score = 38.3 bits (85), Expect = 0.21
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 164 PNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLD 337
P Y I + + V +++ F N+HL SN++A I S++LYP+P K D
Sbjct: 33 PQSWYKIRNQITIQEVAKSLLVFLNAHLSLNNSNQVAFIASTPQGSKFLYPNPEKNYD 90
>UniRef50_A5DKJ5 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 378
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 533 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSV-DKHLSLLQQGCDITGGLYLKI 709
SRILVV+ + +YI MN F AQK +V IDV + K +S LQQ D T G+YL +
Sbjct: 214 SRILVVSPDDNDDIRYIPIMNSIFAAQKMKVSIDVVKLGSKDVSYLQQAADATNGVYLHV 273
Query: 710 PSLEGLLQYL 739
+ EGL+Q L
Sbjct: 274 QNPEGLIQVL 283
Score = 39.1 bits (87), Expect = 0.12
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +2
Query: 161 NPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYP---SPGKP 331
NP Y I + + V +++ F N+HL SN +A + + +LYP S K
Sbjct: 54 NPLGWYNIRNRTTVKEVTKSLIVFMNAHLSLNNSNRVAFLTASPSGARFLYPNTMSDQKD 113
Query: 332 LDVRQID-GQYELFTLVEKTIKMRLVNLIKSQPQEE 436
++ G Y F +V++T+ + L N ++ Q E
Sbjct: 114 TANTLVNRGMYRQFRIVDETVLLELNNEFQAVAQSE 149
>UniRef50_A5E525 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 444
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +2
Query: 506 SAIPGLRTSSRILVVTGSA-DTAAQYINYMNVFFTAQKEQVLIDVCSV-DKHLSLLQQGC 679
S+ + +SRIL+VT S D YI MN FTAQK +V IDV + S LQQ
Sbjct: 249 SSTSSVSMNSRILIVTASDNDNHLNYIPLMNCIFTAQKLKVSIDVAKLGTTDSSYLQQAS 308
Query: 680 DITGGLYLKIPSLEGLLQYL 739
D T G+YLKI G++Q L
Sbjct: 309 DATHGVYLKIEDPRGMIQVL 328
Score = 37.1 bits (82), Expect = 0.48
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +2
Query: 161 NPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLDV 340
+P Y + L N+ +++ F N HL SN++A I S++LYP K
Sbjct: 33 SPLGWYNLRHTTSLENITKSLLVFLNGHLALNNSNQVAFIASSSTGSKFLYPHLAKSNTE 92
Query: 341 RQI------DGQYELFTLVEKTIKMRLVNLIKSQPQ 430
+Q G Y F V + + L+ + + +
Sbjct: 93 KQTRADRISQGMYRQFKNVNEVVLEELIRFVNEEAE 128
>UniRef50_A4R4C6 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 380
Score = 53.6 bits (123), Expect = 5e-06
Identities = 30/70 (42%), Positives = 38/70 (54%)
Frame = +2
Query: 533 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIP 712
SRIL V+ S +A QYI MN F A V +DV ++ LQQG ITGG Y+
Sbjct: 207 SRILTVSVSDSSADQYIPTMNAVFAASSAGVPLDVLALRGAAPFLQQGAFITGGTYIAAT 266
Query: 713 SLEGLLQYLL 742
G+L YL+
Sbjct: 267 EPRGILAYLM 276
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +2
Query: 158 TNPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKP 331
TNP ++ D ++ + ++ F N+HL +S+ +AVI H H++ +LYPSP KP
Sbjct: 28 TNPRAWALLRDVLPISKAIANILVFVNAHLALSSSHSVAVIAAHTHRAVWLYPSPPKP 85
>UniRef50_Q6WGK3 Cluster: ZK1128.4; n=1; Pristionchus pacificus|Rep:
ZK1128.4 - Pristionchus pacificus
Length = 278
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +2
Query: 536 RILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPS 715
RI++++ D +Q+ MN+FF+A K + IDV S+ +LLQQ DIT G++ I
Sbjct: 140 RIVIISLLPDFGSQHSLLMNLFFSAHKHDICIDVVSLGGSSALLQQAADITAGVFQVIHK 199
Query: 716 LEGLLQYLL 742
+E L + L+
Sbjct: 200 IEDLPRILM 208
>UniRef50_Q3KZ74 Cluster: SJCHGC03528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03528 protein - Schistosoma
japonicum (Blood fluke)
Length = 131
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/74 (32%), Positives = 44/74 (59%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLDVRQIDGQYELFTLV 379
L N ++A + F+NSHLM + NE+AVIG + +++YP+ + L DGQ + + +
Sbjct: 29 LPNCIEAALGFANSHLMLSSFNEVAVIGVTPSQIKFIYPNHSETLVGASNDGQNDALSCM 88
Query: 380 EKTIKMRLVNLIKS 421
T++ ++L+ S
Sbjct: 89 NNTVRQLSLDLVTS 102
>UniRef50_Q9P5Y6 Cluster: Related to basic transcription factor 2;
n=1; Neurospora crassa|Rep: Related to basic
transcription factor 2 - Neurospora crassa
Length = 439
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 533 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIP 712
+RILVV+ S + +QYI MN F A ++ ID ++ + LQQ IT G +++
Sbjct: 222 ARILVVSVSDSSPSQYIPTMNAVFAAAHARIAIDTLALRGSATFLQQASYITRGTFIRAQ 281
Query: 713 SLEGLLQYLLW 745
GLLQYL++
Sbjct: 282 EPRGLLQYLMF 292
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +2
Query: 158 TNPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPS 319
TNP + D LT L ++ F NSHL SN++A+I H +++ +LYP+
Sbjct: 31 TNPRAWAALNDVLPLTKALANILIFVNSHLAFNNSNQVALIASHTNRAVWLYPT 84
>UniRef50_Q4PG41 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 422
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 533 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSV-DKHLSLLQQGCDITGGLYLKI 709
SRIL+++ + D + QYI MN F AQK+ + IDVC + K LQQ +T G Y ++
Sbjct: 252 SRILILSVTQDASTQYIPMMNCIFAAQKKGITIDVCKLFGKDTVFLQQASYLTSGTYFRL 311
>UniRef50_Q09645 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 345
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +2
Query: 497 SRRSAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLS--LLQ 670
S +S + ++R +V++ + +++ + MN+FF+A K+ + +DV S+ + +LQ
Sbjct: 184 SEQSETASEKATNRAVVISITPIMGSEHGSLMNLFFSAAKQSICVDVVSMGDDFTGGILQ 243
Query: 671 QGCDITGGLYLKIPSLEGLLQYLL 742
Q DITGG +L + LL+ L+
Sbjct: 244 QAADITGGSFLHAKKPQTLLKILM 267
>UniRef50_Q4X5C5 Cluster: Putative uncharacterized protein; n=7;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium chabaudi
Length = 327
Score = 46.4 bits (105), Expect = 8e-04
Identities = 38/168 (22%), Positives = 70/168 (41%)
Frame = +2
Query: 200 LTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLDVRQIDGQYELFTLV 379
L+ L +V F+ + +S + +I S+ +Y + + Y
Sbjct: 54 LSQFLKSVFQFTRFYCFMSSSERICIIATCSGNSKIIYENYISYTKNNLTENDY-CTNAY 112
Query: 380 EKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRRSAIPGLRTSSRILVVTGS 559
+K IK N S+ E ES C+ R + + + +L ++ S
Sbjct: 113 DKLIKFIKDNNNNSKTYEMV--ESTLSSALAIALCYNNRIC-NLYENINSRIFLLDISKS 169
Query: 560 ADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYL 703
QY MN+ + A++ ++IDV S++ +L+Q C+IT GLY+
Sbjct: 170 HFYTNQYTQLMNIAYNAKRNNIIIDVFSLNHKTQILEQICNITNGLYI 217
>UniRef50_A6QTZ0 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 413
Score = 46.4 bits (105), Expect = 8e-04
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 533 SRILVVTGSADT--AAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLK 706
SRIL+++ S+ T A YI MN F Q+ + ID+ + + LQQ D T G+Y+
Sbjct: 228 SRILIISLSSTTHSAHHYIPIMNSIFACQRLHIPIDILKLAGDAAFLQQASDATRGIYIP 287
Query: 707 IPS-LEGLLQYLL 742
S G LQYL+
Sbjct: 288 ATSHPAGFLQYLM 300
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 158 TNPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKP 331
TNP+ +E L+ + ++ F N+HL +N++AV+ H H + +LYP+P P
Sbjct: 28 TNPHAWARLEPSLPLSAAIANLLVFINAHLACNYANKVAVVASHCHHAAWLYPTPASP 85
>UniRef50_A7API8 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 209
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 536 RILVVTGSADTA--AQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKI 709
RI+ + S A +QYI MNV FTA K + I+ C++ + +L+Q CD+T Y+ +
Sbjct: 40 RIIFIDTSETNAYQSQYIALMNVAFTALKSGITINTCALKRSTRILEQLCDVTNAKYINL 99
>UniRef50_Q2GPB6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 408
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/67 (26%), Positives = 37/67 (55%)
Frame = +2
Query: 158 TNPNXRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHXHKSEYLYPSPGKPLD 337
TNP + D ++ + ++ F N+HL SN++++I H +++ +LYP+P +
Sbjct: 31 TNPRAWAALTDVLPISKAIANILVFVNAHLAFSNSNQVSIIAAHTNRAVWLYPAPPRQGR 90
Query: 338 VRQIDGQ 358
+ +D Q
Sbjct: 91 SQDVDMQ 97
>UniRef50_A2EYI3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 284
Score = 41.1 bits (92), Expect = 0.029
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Frame = +2
Query: 275 VIGCHXHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESX 454
V+ + +E+++P PG+ DV I+ ++ ++ IK N+I + S
Sbjct: 53 VLAYNQSHAEFIFPEPGRTKDV--INQKFNPTN--QEQIKNYFENIIIQIAEFNGRSASI 108
Query: 455 XXXXXXXXXCFIARSR--RSAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVL 628
+++S + +P RIL + S +T +Q Y N+ F A++ V+
Sbjct: 109 PPTPHVRLDVALSKSLCLMNNLPNKNIKKRILAFSVSPETGSQ---YDNLLFAAKRLDVV 165
Query: 629 IDVCSVDKH-LSLLQQGCDITGGLYLKIPSLEGLLQYL 739
IDV ++ + L L Q D+T G I L QYL
Sbjct: 166 IDVLFLNSNRLCFLSQAADLTHGFSKTIKMGAALAQYL 203
>UniRef50_Q7YZ09 Cluster: Transcription factor, possible; n=3;
Cryptosporidium|Rep: Transcription factor, possible -
Cryptosporidium parvum
Length = 311
Score = 37.9 bits (84), Expect = 0.27
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +2
Query: 443 GESXXXXXXXXXXCFIARSRRSAIPGLRTSSRILVVTGSA--DTAAQYINYMNVFFTAQK 616
GE C I +R+ RI+++ S + +QY++ +N F +QK
Sbjct: 103 GEMKMSPTISKCLCKINSTRKKFGYNRSEKDRIILLDASNKDEYISQYVSLLNCGFASQK 162
Query: 617 EQVLIDVCSVDKHLS-LLQQGCDITGGLYLK 706
V+IDV SV ++ S LL DI GL LK
Sbjct: 163 LDVVIDVVSVTRNPSPLLNNLVDICNGLNLK 193
>UniRef50_A2X0D6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 243
Score = 37.1 bits (82), Expect = 0.48
Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 620 QVLIDVCSVDKHLS-LLQQGCDITGGLYLKIPSLEGLLQYL 739
+V ID C V S LQQ ITGG+YLK L GL QYL
Sbjct: 126 RVPIDSCIVGTQDSAFLQQASYITGGVYLKPQELNGLFQYL 166
>UniRef50_UPI00006CF9B9 Cluster: hypothetical protein
TTHERM_00420200; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00420200 - Tetrahymena
thermophila SB210
Length = 351
Score = 36.7 bits (81), Expect = 0.63
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Frame = +2
Query: 236 NSHLMQKASNELAVIGCHXHKSEYLYP-----SPGKPLDVRQIDG-QY-ELFTLVEK-TI 391
NSHL++ N + + +S+ ++P S + D +ID Y E+ ++K TI
Sbjct: 58 NSHLIKSIYNSAYIYLTNSRESKMIFPINSNISKDEDSDQNRIDNLDYSEIQARIQKRTI 117
Query: 392 KMRLVNLIKSQPQEEK-PGESXXXXXXXXXXCFIARSRRSAIPGLRTSSRILVVTGSADT 568
+ N+ + P + + + + I + S IL+ T S
Sbjct: 118 EFMQQNMADNINYSRLIPALTQSLCKINKVGIQLEKKLANQIENEKYYSSILMFTVSEIH 177
Query: 569 AAQYINYMNVFFTAQKEQVLIDVCSV------DKHLSLLQQGCDITGGLYLKI 709
++ YIN M+ TA K +V I V + D L+Q C +T G YLKI
Sbjct: 178 SSSYINLMSAIETAIKHKVKIFVFEIPEANLSDNTQDYLKQLCSLTQGFYLKI 230
>UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: LigA
- Mycobacterium sp. (strain MCS)
Length = 634
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +1
Query: 544 RGHGQRRHRCAVHQLHERVLHRTEGASPDRRVLCGQTLESAATGLRHHGR 693
RG RRHR H+ ER G S D C + +GL HH R
Sbjct: 156 RGRAHRRHRRRSHRRQERRGRHRRGGSGDGHRTCARGRRRPRSGLHHHRR 205
>UniRef50_A6EGU1 Cluster: Cysteine desulfurase; n=1; Pedobacter sp.
BAL39|Rep: Cysteine desulfurase - Pedobacter sp. BAL39
Length = 382
Score = 34.3 bits (75), Expect = 3.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 217 IQDVCEHFGVLYYVSXIGIGVHYYHEETAVRGHIVVC 107
I D+CE + +Y+ + HY H+ ++ H +VC
Sbjct: 163 IGDLCEQYDAIYHSDTVQTMGHYVHDVRKLKAHFIVC 199
>UniRef50_A7B3K6 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 302
Score = 33.9 bits (74), Expect = 4.5
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -2
Query: 244 MGVTKCYYSIQDVCEHFGVLYYV-SXIGIGVH--YYHEETAVRGHIVVCHC 101
M V C Y++ D+ +HFGV Y + + IG G++ + +E GH HC
Sbjct: 36 MMVGGCAYNVADILKHFGVNYTLFAPIGTGMYADFIRKELKKAGHESPVHC 86
>UniRef50_Q6A8U9 Cluster: Conserved protein; n=1; Propionibacterium
acnes|Rep: Conserved protein - Propionibacterium acnes
Length = 257
Score = 33.1 bits (72), Expect = 7.8
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 562 RHRCAVHQLHERVLHRTEGASPDRRVLCGQTLESAATGL--RHHGRPVPEDTELGGLAAV 735
R R A H++H + L +SPD L G + S T L +HH PV T GG AV
Sbjct: 113 RLRLAAHRVHAQELDSLVLSSPDGGDLRGAAMLSKLTRLWSQHHHLPVRIATNRGGATAV 172
>UniRef50_Q09EC3 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 567
Score = 33.1 bits (72), Expect = 7.8
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 532 QPYPRGHGQRRHRC-AVHQLHER-VLHRTEGASPDRRVLCGQTLESAATGLRHHGRPVPE 705
QP R ++RHR H L + VLH+ + + + G LE G HH RPVP
Sbjct: 22 QPGARDGAEQRHRAHRAHPLAQLPVLHQQRAG--EGQTVQGDGLEGLL-GTGHHHRPVPR 78
Query: 706 DTELGGLAAVL 738
E+ G A +L
Sbjct: 79 RQEVVGRAGLL 89
>UniRef50_Q4U8M4 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 391
Score = 33.1 bits (72), Expect = 7.8
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 539 ILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSL 718
I ++ S + +QYI MN+ ++A + + I+ ++ + +L+Q IT YL + L
Sbjct: 209 IFDISNSENYKSQYIGLMNIAYSALSQNITINTFALGQPSRILEQLSAITNAKYLLVSKL 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,624,705
Number of Sequences: 1657284
Number of extensions: 14814812
Number of successful extensions: 39134
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 37646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39101
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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