Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D12
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.88 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   4.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   4.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   6.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 223 YSIQDVCEHFGVLYYVSXIGIGVHYYH 143
           Y+  D+ E   + Y+   +GI +H++H
Sbjct: 183 YTASDLEEEHRLAYFREDLGINLHHWH 209


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 223 YSIQDVCEHFGVLYYVSXIGIGVHYYH 143
           ++  D+ E   V Y+   IG+ +H++H
Sbjct: 183 FTASDLDEEHRVAYWREDIGLNLHHWH 209


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 82  SCDLIVSNGRRRCAL*QQSPRGNSGHQSQSXIHNRGPQNAHKR 210
           SC +I    R +C   +     N G    +  H RGP+N+  R
Sbjct: 81  SC-IIDKTHRNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 82  SCDLIVSNGRRRCAL*QQSPRGNSGHQSQSXIHNRGPQNAHKR 210
           SC +I    R +C   +     N G    +  H RGP+N+  R
Sbjct: 81  SC-IIDKTHRNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 119 HRRLPLLTIKSHEVSTLI*IVIK 51
           H  + ++T+K H+ STL  I++K
Sbjct: 82  HVFVTMMTLKRHKWSTLFEILLK 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,360
Number of Sequences: 336
Number of extensions: 3748
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)