Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D11
         (852 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    28   0.31 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.9  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   8.9  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 0.31
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 417 KCTERYAKAKAVNSILRHVAELLHYETSEQ 506
           KC +R   A  V+SILR+ A + H  T  Q
Sbjct: 793 KCAKRRLLASVVDSILRYAAPVWHEATKNQ 822


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 482  ELCYMSQDRVYCFRFCIAFCALVYIFSRYTT 390
            + CY  +D +     CI  C +V  +S  +T
Sbjct: 2363 DFCYHDEDEMVTVLDCITLCVMVVSYSAEST 2393


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = +3

Query: 351 RVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAE--LLHYETSEQLEEL 518
           RV   K  +DL    +         ERY     ++  LR  AE  L  ++   QL+EL
Sbjct: 160 RVRPLKKQLDLEAAWMQPSSTISLVERYDNNAQLSIALRTAAELKLFRFDNQYQLKEL 217


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
 Frame = +3

Query: 552 YKKKASAYDFFKQAAVDPSVLDE------CGLDEETKDVLLANIK-----RKLTSQAVKI 698
           Y +  S +DF     VDP  + E       GL     D++    K     R L S+ + +
Sbjct: 136 YHENGSLFDFLTARCVDPDTMLEMAFSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILV 195

Query: 699 RADIECACYGYEGIDAVRXALKAGLXLSTVDMP 797
           ++++ C C G  G+ AVR  +       TVD P
Sbjct: 196 KSNLTC-CIGDLGL-AVRHIVAT----DTVDQP 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,045
Number of Sequences: 2352
Number of extensions: 13005
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)