Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_D11
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical... 262 2e-70
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical pr... 30 2.4
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 30 2.4
AY313177-1|AAP79302.1| 676|Caenorhabditis elegans myotubularin-... 30 2.4
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 29 3.2
Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical p... 29 5.5
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL132858-15|CAB60482.3| 300|Caenorhabditis elegans Hypothetical... 29 5.5
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr... 28 9.7
>AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical
protein Y37E3.10 protein.
Length = 342
Score = 262 bits (642), Expect = 2e-70
Identities = 130/238 (54%), Positives = 165/238 (69%)
Frame = +3
Query: 138 LSCRFXXXXXXXXXXXXXXXVXSIAEMGAYVHLLEYNNIEGMXXXXXXXXXXXXXXNKLI 317
+ CRF V IA+MGAYV L EYN+ EGM NKLI
Sbjct: 1 MKCRFYENQFPDVEETVVANVKMIADMGAYVRLSEYNDKEGMILLSELSRRRIRSVNKLI 60
Query: 318 RVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYET 497
RVG++E VVVIRVDK+KGYIDLSKRRV +D+ +C ER+A AK VNSILRHVAE + Y T
Sbjct: 61 RVGRSESVVVIRVDKDKGYIDLSKRRVYQKDLKQCDERFANAKMVNSILRHVAEQVGYTT 120
Query: 498 SEQLEELYKKTAWYFEEKYKKKASAYDFFKQAAVDPSVLDECGLDEETKDVLLANIKRKL 677
E+LE+LY+KTAW+F+ K K+KA++YD FK+A +P++LDEC + + K+ LL +I++KL
Sbjct: 121 DEELEDLYQKTAWHFDRKEKRKAASYDAFKKAITEPTILDECDISADIKEKLLEDIRKKL 180
Query: 678 TSQAVKIRADIECACYGYEGIDAVRXALKAGLXLSTVDMPIKINLIAPPWYVMTTSXL 851
T QAVKIRADIE +C+ Y+GIDAV+ AL AG S PIKINLIA P +V+TT L
Sbjct: 181 TPQAVKIRADIEVSCFDYDGIDAVKAALIAGKNCSNGTFPIKINLIAAPHFVVTTQTL 238
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 339 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEEL 518
++VIR + L R S +D+Y+ +R AK +VN V ELL +E E +E++
Sbjct: 175 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVN-----VTELLAFENREPVEDV 229
Query: 519 --YKKTAWYFE 545
+++ W E
Sbjct: 230 RGWRRLDWNSE 240
>Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical
protein F53A2.8a protein.
Length = 676
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 339 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEEL 518
++VIR + L R S +D+Y+ +R AK +VN V ELL +E E +E++
Sbjct: 69 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVN-----VTELLAFENREPVEDV 123
Query: 519 --YKKTAWYFE 545
+++ W E
Sbjct: 124 RGWRRLDWNSE 134
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 339 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEEL 518
++VIR + L R S +D+Y+ +R AK +VN V ELL +E E +E++
Sbjct: 175 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVN-----VTELLAFENREPVEDV 229
Query: 519 --YKKTAWYFE 545
+++ W E
Sbjct: 230 RGWRRLDWNSE 240
>AY313177-1|AAP79302.1| 676|Caenorhabditis elegans
myotubularin-related protein MTM-6A protein.
Length = 676
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 339 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEEL 518
++VIR + L R S +D+Y+ +R AK +VN V ELL +E E +E++
Sbjct: 69 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVN-----VTELLAFENREPVEDV 123
Query: 519 --YKKTAWYFE 545
+++ W E
Sbjct: 124 RGWRRLDWNSE 134
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 29.5 bits (63), Expect = 3.2
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Frame = +3
Query: 318 RVGKTEPVVVIRVDKEKGYI--DLSKRRVS-AEDIYKCTERYAKAKAVNSILRHVAELLH 488
RVGK + VV+ +V+K G+I + +R + A ++ E + A N L + LH
Sbjct: 120 RVGKAQIVVMEKVEKATGHIIQEFHERELDLARNVEILQEENSNLTAKNEKLEETVDDLH 179
Query: 489 YETSEQLEELYKK-TAWYFEEKYKKKASAYDFFKQAAVDPSVLDECGLDEETKDVLL-AN 662
E LE K+ T + + K S+ + F + D + L+EET+ VL
Sbjct: 180 -EKVANLETSNKELTEINVDNERKISNSSDEIF--SLQDLLGKTKVQLEEETEKVLQERT 236
Query: 663 IKRKLTSQAVKIRAD 707
I L +Q +K R +
Sbjct: 237 IVENLKAQFLKERKE 251
>Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical
protein K06B4.9 protein.
Length = 292
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 458 RVYCFRFCIAFCALVYIFSR-YTTFR*VYVSFFFVHSDY 345
R Y + CI FCA+ Y FS+ + + + SF F +SD+
Sbjct: 124 RNYLWITCIIFCAVCYEFSKCFLKYNPNHWSFEFENSDF 162
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 457 RSCDM*QSSSIMKLLSNWKNFIK-KQLGTLKRNI 555
R D +SS KLL NWK F+K +++ +L RN+
Sbjct: 154 RKFDNSKSSCQKKLLKNWKIFLKIRKMLSLSRNV 187
>AL132858-15|CAB60482.3| 300|Caenorhabditis elegans Hypothetical
protein Y113G7A.10 protein.
Length = 300
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 515 FFQLLRSFIMEELCYMSQDRVYC-FRFCIAFCALVYI 408
FFQ FI++ ++ + C + FCI FC + I
Sbjct: 133 FFQFFERFILDNSELFNRLKAVCKYSFCIVFCVFITI 169
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Frame = +3
Query: 492 ETSEQLEELYKKTAWYFEEKYKKKASAYDFFKQAAV------DPSVLDECGLDEET-KDV 650
E ++ E KK + E K + D K A+ DP V ++ DEE KD
Sbjct: 71 EMKDEESEFEKKYMKGYNENIKDEPEGQDGMKGIAMYSTNKDDPYVTEQVDSDEEEEKDE 130
Query: 651 LLANIKRKLTSQAVKIRADIECACYGYEGIDA 746
++ + + A + D CY Y D+
Sbjct: 131 IMVRKDDNMVAVAKIDKGDFTLECYVYNEADS 162
>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
protein C27B7.7 protein.
Length = 1471
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 439 KRKQ*TRSCDM*QSSSIMKLLSNWKNFIKKQLGTLKRN 552
+RK R M QSS+I+K L N + F K +L T + N
Sbjct: 2 RRKNFIRRFQMQQSSNILKHLENHEVFCKTELKTCQIN 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,638,320
Number of Sequences: 27780
Number of extensions: 314867
Number of successful extensions: 910
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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