Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D10
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   1.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.1  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   8.9  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    21   8.9  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    21   8.9  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   8.9  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 416 FLRGAPPHSHRQDFAPDRCSSLIFQK*III 505
           FLR  PP+SH+ D   +      + K I I
Sbjct: 144 FLRTVPPYSHQTDVWVELLKHFNYMKVIFI 173


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 135 ETPVVAAVHTPVIHTVPIVAAKTTVTKSSQVVNH 236
           + P++  +  PV+ +     +  T TKS+ V NH
Sbjct: 311 QCPMLQKLEKPVLSSSTTTTSPMTSTKSTIVRNH 344


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 93  LLACTAAAPGLLLHETPVVAAVHTPVIH 176
           LLA    A G + H  P  A  H  ++H
Sbjct: 8   LLALLTLAAGEIAHNDPHFAPGHDAIVH 35


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 380 YRSGVDDWDRV 348
           YR  +D+WDR+
Sbjct: 126 YRIAIDEWDRL 136


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 165 EYGQQLPLGFRGGAGR 118
           EY ++ P+GF+G  G+
Sbjct: 105 EYYKRAPMGFQGMRGK 120


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 165 EYGQQLPLGFRGGAGR 118
           EY ++ P+GF+G  G+
Sbjct: 106 EYYKRAPMGFQGMRGK 121


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 165 EYGQQLPLGFRGGAGR 118
           EY ++ P+GF+G  G+
Sbjct: 105 EYYKRAPMGFQGMRGK 120


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 165 EYGQQLPLGFRGGAGR 118
           EY ++ P+GF+G  G+
Sbjct: 105 EYYKRAPMGFQGMRGK 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,978
Number of Sequences: 438
Number of extensions: 2776
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)