Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_D08
         (446 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129458-1|AAM76200.1|   82|Drosophila melanogaster RE67573p pro...   132   2e-31
AE014296-2571|AAS64990.1|   82|Drosophila melanogaster CG6244-PA...    93   2e-19
U06460-1|AAC46481.1|  704|Drosophila melanogaster transcription ...    29   2.2  
AY051960-1|AAK93384.1|  704|Drosophila melanogaster LD42828p pro...    29   2.2  
AE013599-1190|AAF58737.1|  704|Drosophila melanogaster CG7704-PA...    29   2.2  
U36792-1|AAC46928.1|  723|Drosophila melanogaster DHR96 protein.       29   2.8  
AY051486-1|AAK92910.1|  723|Drosophila melanogaster GH14435p pro...    29   2.8  
AE014297-3687|AAF56379.1|  723|Drosophila melanogaster CG11783-P...    29   2.8  

>AY129458-1|AAM76200.1|   82|Drosophila melanogaster RE67573p
           protein.
          Length = 82

 Score =  132 bits (320), Expect = 2e-31
 Identities = 56/65 (86%), Positives = 60/65 (92%)
 Frame = +1

Query: 118 EALDQQFNCPFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDA 297
           E LDQQFNCPFCNHEKSCEVKMD++RNTA+I CRVCLEDFQT  N LSEPIDVYNDWVDA
Sbjct: 18  EPLDQQFNCPFCNHEKSCEVKMDKSRNTAKITCRVCLEDFQTGINFLSEPIDVYNDWVDA 77

Query: 298 CESAN 312
           CE+AN
Sbjct: 78  CETAN 82


>AE014296-2571|AAS64990.1|   82|Drosophila melanogaster CG6244-PA
           protein.
          Length = 82

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 36/59 (61%), Positives = 45/59 (76%)
 Frame = +1

Query: 136 FNCPFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESAN 312
           F+CPFCNH++SCE K+D+A+   RI C VC E FQT  N L+E IDV+NDW+DACE  N
Sbjct: 24  FDCPFCNHKQSCEAKLDKAKKIGRITCTVCQEFFQTHINYLTEAIDVFNDWIDACEEEN 82


>U06460-1|AAC46481.1|  704|Drosophila melanogaster transcription
           initiation factorTFIID 85 kDa subunit protein.
          Length = 704

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -3

Query: 375 YIYRSIYSFHN*KT*TKNSYLIRTFTSIHPVIIYIYWLRQNICCCLEIF 229
           YI   I   H+     ++ YL+RTF S +   + +++ R+N+  C+ +F
Sbjct: 654 YISNHITVSHHQDENDEDVYLMRTFPSKNSPFVSLHFTRRNLLMCVGLF 702


>AY051960-1|AAK93384.1|  704|Drosophila melanogaster LD42828p
           protein.
          Length = 704

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -3

Query: 375 YIYRSIYSFHN*KT*TKNSYLIRTFTSIHPVIIYIYWLRQNICCCLEIF 229
           YI   I   H+     ++ YL+RTF S +   + +++ R+N+  C+ +F
Sbjct: 654 YISNHITVSHHQDENDEDVYLMRTFPSKNSPFVSLHFTRRNLLMCVGLF 702


>AE013599-1190|AAF58737.1|  704|Drosophila melanogaster CG7704-PA
           protein.
          Length = 704

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -3

Query: 375 YIYRSIYSFHN*KT*TKNSYLIRTFTSIHPVIIYIYWLRQNICCCLEIF 229
           YI   I   H+     ++ YL+RTF S +   + +++ R+N+  C+ +F
Sbjct: 654 YISNHITVSHHQDENDEDVYLMRTFPSKNSPFVSLHFTRRNLLMCVGLF 702


>U36792-1|AAC46928.1|  723|Drosophila melanogaster DHR96 protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 130 QQFNCPFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSE 264
           +QF CPF    ++C++ +   R   + + R CL+    + N++SE
Sbjct: 39  KQFTCPF---NQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSE 80


>AY051486-1|AAK92910.1|  723|Drosophila melanogaster GH14435p
           protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 130 QQFNCPFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSE 264
           +QF CPF    ++C++ +   R   + + R CL+    + N++SE
Sbjct: 39  KQFTCPF---NQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSE 80


>AE014297-3687|AAF56379.1|  723|Drosophila melanogaster CG11783-PA
           protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 130 QQFNCPFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSE 264
           +QF CPF    ++C++ +   R   + + R CL+    + N++SE
Sbjct: 39  KQFTCPF---NQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSE 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,617,112
Number of Sequences: 53049
Number of extensions: 237171
Number of successful extensions: 680
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)